| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0111 |
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| Symbol | |
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| ID | 5711734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 109578 |
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| End bp | 110813 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641266006 |
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| Product | transmembrane transporter |
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| Protein accession | YP_001531461 |
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| Protein GI | 159042667 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACACC GCGCCCCCCT CGTCACCCCG GTCCTTCTGG CCGGGTGCGT CATCATCCTC
GTGAGCTTCG CGATCCGGTC CGCCTTCGGG GTGTTCCAGA TCCCGATACA GGAGGAGTTC
GGCTGGCTGC GGGCGGAATT TTCGCTCGCC ATTGCAATCC AGAACCTCGC CTGGGGGATC
GGCGCCCCGC TCTTCGGCGC CATCGCCGAA CGGTTCACCG ACCGCAAGGC CATCATGCTG
GGCATCGCGC TTTACACTGT CGGGCTCCTG CTGAGCGCGG TGGCGACCAC ACCGATGCAG
CACAACCTGC TGGAGATGCT TGTAGGCTTC GGCATCGCGG GGACCGGGAT GGGGCTGATC
CTGGCTATCG TCGGGCGGGC AAGCTCGGAC GAGAATCGGT CCATGGCGCT CGCCATCGCG
ACCGCGGCGG CCTCCGGCGG GCAGATCTTC GGCCCCCCCG TGGCCGAGGC GCTCCTAAGC
ATCGTATCGC TGCAAGCGGT GTTCGTGATC TTCGCGCTCG CGGTGCTCTC GACGCTGTTG
GTCCTGCCGG CCTTGAAGGC GAGACCCGGC GCGACGCCGA CCCTGTCCGA ATCCATGGGC
CCCGCCGTCG CCCGCGCCTT GAAGGACCCG AATTTCACCC TGATCTTTCT TGGATTCTTT
TCATGCGGCT ATCAGCTCGG CTTCATCACC GCGCATTTCC CGGCCTTCGT GACCGAGCTT
TGCGGGCCGA TCTCCCCCGG CGGCATGCTT GCCGGGCTTG GGATCACCAC GAATTCGGCC
CTTGGCGCCA TCGCTATCTC GCTGATCGGT GTCGCCAATA TCGCGGGCGT TCTCGCGGCG
GGCTGGGCGG GCAAGCGGTA CCGCAAGAAA TCCCTCTTGG CGGGCATCTA CCTTGCGCGC
ACCCTGGTGG CTGCGGCGTT CATCATGGTG CCCATCACGC CCGAAACCGT GATCCTGTTC
TCCCTCGGCA TGGGCGCGCT GTGGCTTGCC ACGGTGCCGC TGACCTCCGG GCTGGTCGCC
CATCTCTACG GGGTCAGATA CATGGGCACG CTTTACGGGG TCGTGTTCCT GAGCCACCAG
ATCGGCAGCT TCACGGGCGT CTGGCTGGGC GGCAGGCTCC ATGACCTTTA CGGCGACTAT
ACGCTGGTCT GGTGGGTTGG TGTCGGCGTC GGGCTGTTCT CGGCGCTCGT CCATTTGCCA
ATCAAGGAAC GGCCCGCGAG CCCGCTGCCC GCCTGA
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| Protein sequence | MEHRAPLVTP VLLAGCVIIL VSFAIRSAFG VFQIPIQEEF GWLRAEFSLA IAIQNLAWGI
GAPLFGAIAE RFTDRKAIML GIALYTVGLL LSAVATTPMQ HNLLEMLVGF GIAGTGMGLI
LAIVGRASSD ENRSMALAIA TAAASGGQIF GPPVAEALLS IVSLQAVFVI FALAVLSTLL
VLPALKARPG ATPTLSESMG PAVARALKDP NFTLIFLGFF SCGYQLGFIT AHFPAFVTEL
CGPISPGGML AGLGITTNSA LGAIAISLIG VANIAGVLAA GWAGKRYRKK SLLAGIYLAR
TLVAAAFIMV PITPETVILF SLGMGALWLA TVPLTSGLVA HLYGVRYMGT LYGVVFLSHQ
IGSFTGVWLG GRLHDLYGDY TLVWWVGVGV GLFSALVHLP IKERPASPLP A
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