| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0091 |
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| Symbol | prc |
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| ID | 5711714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 89783 |
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| End bp | 91120 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641265986 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_001531441 |
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| Protein GI | 159042647 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0132582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.640744 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAT TCGTGATGGC CGCACTGGGC GGCACAGTGG CAGGCGCCCT GCTGACAACC
CAAGTCGCAG GGCCACTGCT GGCACAGGAC AACGCGCGCA ACACCTCGGT CTACGAGCAG
CTTGACCTGT TCGGGGACAT CTTCGAGCGC ATCCGCGCGC AATATGTCGA ACAGGTGGAT
GAAGGCGAGT TGATCGAGGC TGCGATCAAC GGGATGCTCA CCTCGCTCGA CCCCCATTCC
AGCTATCTCG CGCCGAAGGA TTTCGGCGAC ATGCAGGTGC AGACCAGAGG CGAGTTCGGC
GGACTGGGGA TCGAGGTCAC CCAGGAAGAC GGGTTCGTGA AGGTCGTCTC GCCCATCGAT
GACACGCCGG CGGCCGAGGC AGGGATCGAG GCGGGCGATT TCATCACCCA TGTGGACGGC
GAGAGCGTAC TTGGCCTGAC CCTGGACGCT GCGGTCACCA TGATGCGGGG CCCGGTGGGC
TCCGAAATTG TGATCACCGT GGTGCGCGAG GGCTTCGACG AGCCCTTCGA CGTCACCATC
ACCCGCGACA CCATCAAGCT CACCGCCGTG CGCAGCCGGG TCGTCCGCGA CACGGTGGTC
ATGCGGATCA CCACCTTCAA CGACCAGACC TTCCCGAACC TCGAAGAGAA GATGGCCGAA
GAGGTGGCCG AATTGGGCGG GATGGAAGCT GTCAGCGGTT TCGTGATCGA TCTGCGCAAC
AACCCCGGTG GCTTGTTGAC CCAGGCGATC AAGGTCTCCG ACGCGTTTCT CGACAAGGGG
GAAATCGTCT CCACCCGCGG CCGCGATCCT CAGGACGGGG AGCGGTTCAA TGCAACCCCG
GGTGACCTCG CCGAAGGCAA GCCGATCGTC GTGCTGATCA ATGGCGGCTC GGCCTCGGCC
TCGGAAATCG TGGCAGGCGC GCTGCAGGAT CATCGCCGCG CCATCGTCGT CGGCACCAAG
AGCTTCGGCA AGGGGTCGGT GCAGTCGGTC GTGCCGCTGC GGGGGGATGG TGCCATGCGT
CTGACGACGG CGCGCTACTA CACGCCCTCT GGCCGGTCGA TCCAGTCGCT CGGCGTGTCA
CCGGATATTG TGGTCGCGCA ACCGCCCCGG CGCGTGGAGG CTGAGGAGGA CGAGGAGGCG
AACAACCGCC CGCGCCGGTC CGAAGCGGAT CTGCGCGGCG CTCTGGACAA CGATTCGATC
TCGGAGGCCG AGCGTGAGCA GCTTCTCAAG GAGCGGCAAA AGGCCGAAGA TGCCGCCGAG
TTGCGCGAAG AGGATTACCA GCTTGCCTAC GCCATCGACA TCCTCAAGGG GCTGAACGCG
CTGGGGCCGA CCGACTGA
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| Protein sequence | MKKFVMAALG GTVAGALLTT QVAGPLLAQD NARNTSVYEQ LDLFGDIFER IRAQYVEQVD
EGELIEAAIN GMLTSLDPHS SYLAPKDFGD MQVQTRGEFG GLGIEVTQED GFVKVVSPID
DTPAAEAGIE AGDFITHVDG ESVLGLTLDA AVTMMRGPVG SEIVITVVRE GFDEPFDVTI
TRDTIKLTAV RSRVVRDTVV MRITTFNDQT FPNLEEKMAE EVAELGGMEA VSGFVIDLRN
NPGGLLTQAI KVSDAFLDKG EIVSTRGRDP QDGERFNATP GDLAEGKPIV VLINGGSASA
SEIVAGALQD HRRAIVVGTK SFGKGSVQSV VPLRGDGAMR LTTARYYTPS GRSIQSLGVS
PDIVVAQPPR RVEAEEDEEA NNRPRRSEAD LRGALDNDSI SEAEREQLLK ERQKAEDAAE
LREEDYQLAY AIDILKGLNA LGPTD
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