| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0083 |
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| Symbol | leuD |
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| ID | 5711706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 82492 |
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| End bp | 83097 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641265978 |
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| Product | isopropylmalate isomerase small subunit |
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| Protein accession | YP_001531433 |
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| Protein GI | 159042639 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.384389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.18722 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAAAT TCACCAAGCT GACCGGGATC GCGGCGCCCA TGCCGCTGGT CAATATCGAC
ACCGACATGA TCATCCCCAA GCAGTTCCTC AAAACGATCA AGCGCTCCGG CCTGGGCGTG
AACCTGTTCG ACGAGATGCG CTATGACCGG CAGGGCAACG AGAACCCGGA TTTCGTGCTG
AACAAGCCGC AATACCGCGA CGCCCAGATC CTCGTGACCG GCGAGAATTT CGGCTGCGGC
TCGTCGCGGG AACACGCCCC CTGGGCGCTG CTGGATTTCG GCATCCGCTG CGTGATCGCG
CCGAGCTTTG CCGATATCTT CTACAACAAC TGCTTCAAGA ACGGCATCCT GCCCATCGCC
CTGCCCCAGG AAGAGGTGGA CAAGCTGATG GACGATGCGG CGCGGGGGGC AAACGCGACC
GTCACCGTCG ATCTGGAGAA CCAGACGATC TCCGGCCCCG ACGGCGGCAC GATCTCCTTC
GAGGTGGACG CCTTCAAGAA GCACTGCCTG CTCAATGGGC TCGACGATAT CGGGCTGAGC
CTTGAGAAGG TCGCGTCCAT CGATGCGTTC GAGGCTCAGG CCAGCGCGGC ACGGCCTTGG
GTCTGA
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| Protein sequence | MEKFTKLTGI AAPMPLVNID TDMIIPKQFL KTIKRSGLGV NLFDEMRYDR QGNENPDFVL
NKPQYRDAQI LVTGENFGCG SSREHAPWAL LDFGIRCVIA PSFADIFYNN CFKNGILPIA
LPQEEVDKLM DDAARGANAT VTVDLENQTI SGPDGGTISF EVDAFKKHCL LNGLDDIGLS
LEKVASIDAF EAQASAARPW V
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