Gene Dshi_0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0082 
Symbol 
ID5711705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp81262 
End bp82386 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content71% 
IMG OID641265977 
Producthypothetical protein 
Protein accessionYP_001531432 
Protein GI159042638 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.431101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.216389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTTG CCCGCCTGTT CCGATTTTGC CTTGTGCTGG CCCTGCTGGT CGGCCCGCTG 
CGTTTGACCG CCGAGACCGT GCGCGTGGCC TATTTCCATA CCGAGCTCTC GGCGCGCGGG
CCGGGGCTGC TTCTGCGCGA CCTGCGGCGG GATGAGGCGC CGGACCAACT CGCCGCGGTG
CTGGATATAT TGGTGGAGAC CGCACCGGAC ATCGTCCTGC TGGCCGATAT CGATTACGAC
GCGGGGCAAG CCACTTTGGC CGCGCTGCAA ACGGCCCTGG CCCAGCGCGG CCTGCCCCTT
CCCCACGGAT TTACCGCCGC ACCGAACACC GGCGTGCCCA CCGGCCTCGA CCTCGACCGC
GACGGGAAAT GGGACGAACC CGAAGACACC CAGGCCTTTG GCGAGTTTCG CGGCGCGGGC
GGGCTGGTGC TGCTGTCACG CTACCCGATT CTGCGCGACG AGATCACCGA CCTGTCGGGC
CTGCTCTGGG CCGAGTTTCC CGCCGCCAGC CTGCCCGAAA CTTACGGTCC CGAAGAACAG
GCCGTGATCC GGTTGTCGGC CACGGGGCAT TGGGACGTGC CCGTGCGCCT GCCCTCGGGC
GACGTGCTGC GGCTTCTGAC CCTGCACGCC ACGCCGCCCG TGTTCGACGG TCCGGAGGAT
CGCAACGGGC GGCGCAACGC GGACCAGATG CGGCTCTGGG CCGACTACCT CAACGGCTGG
CGCCCGGAAG GCACCGCCCC CCCGCTCGGG AAGGCCGTGG TTCTGGGTAC GCTCAACGCC
GACCCGCAGG ATGGGGAGGC CCGCCCCGGC GCCCTCGCCC GCCTGCGCGC CCACCCACGC
CTTCAGGACC CTGCCCCACA AGCGACGGGG GCGGCTGCGG CCACTCGGGC GCAGGGCGGC
GTGAACGCCC GGCACGGCGG CGATCCCGCG CACGATACGG TGGACTGGCC CGACACGCGC
CCAACCGATC CCGGCAACCT GCGGGTTGAT TACATCCTGC CCACGCGGGA CCTGACCGTG
ACCGGCGCCG GTCTGCACTG GCCCGACCCG GAGGACGCCG CGGCGCTGGC ACGAACCGAG
ACCGCATCCC GCCACCGGCT GATCTGGGTC GACCTGCGCC CTTGA
 
Protein sequence
MRLARLFRFC LVLALLVGPL RLTAETVRVA YFHTELSARG PGLLLRDLRR DEAPDQLAAV 
LDILVETAPD IVLLADIDYD AGQATLAALQ TALAQRGLPL PHGFTAAPNT GVPTGLDLDR
DGKWDEPEDT QAFGEFRGAG GLVLLSRYPI LRDEITDLSG LLWAEFPAAS LPETYGPEEQ
AVIRLSATGH WDVPVRLPSG DVLRLLTLHA TPPVFDGPED RNGRRNADQM RLWADYLNGW
RPEGTAPPLG KAVVLGTLNA DPQDGEARPG ALARLRAHPR LQDPAPQATG AAAATRAQGG
VNARHGGDPA HDTVDWPDTR PTDPGNLRVD YILPTRDLTV TGAGLHWPDP EDAAALARTE
TASRHRLIWV DLRP