Gene Dshi_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0078 
Symbol 
ID5711700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp76953 
End bp77537 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content69% 
IMG OID641265972 
Producthypothetical protein 
Protein accessionYP_001531428 
Protein GI159042634 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0266361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCTTGT CGGCATTCGC GCGGACCTCC CGGCAGGGAC CTGCTGCCAC GGCGCGCTTG 
CTCTTGGACG GCGCGCTGGC CCCGGCGGTC CGCTGTCCCG ACGACCATGG ATGGGAGGCG
ATCCGGGTGC TCGAGACACA GATAAACCGC CACCGAAAGC CGCTCGCGCG CTCGCTGCGA
CACGCGGATG GACAGCTGAC GACCGAAGCG CTCGCCGCGA GCTACGGGCT GCGCTATGTC
ACGATTACCC GTCTTGTGGA GTTGACCCTG CTTCCGCCAG CGGATCGCCA CAAGGTGGAC
GGGCGGCGGA TGGAGGGCTA TCCGGTGGCC GCCGTCGAAC AGCTCTTCGC GCACCATCGC
ACCCTCAGCG ATCTGGCCGC GGCGCATGGC TGCAGCCCGC ACCTGATGGC GCCGCTGCTC
GCCCGGCTCG GCGTGCGTCC GTTGATCGCC GAGAAGGGCC ACACCCGCCT CTACGCCATT
GCCGATCTGC CCCCCGCGAT CCGCCTGGCC GAGGAGGTCG CAAAGGCCCA GGCCCGCACT
GCGCGGTTCA AGACACCGCA AAAGGGTGCT CTGTCACAGG AGTAG
 
Protein sequence
MSLSAFARTS RQGPAATARL LLDGALAPAV RCPDDHGWEA IRVLETQINR HRKPLARSLR 
HADGQLTTEA LAASYGLRYV TITRLVELTL LPPADRHKVD GRRMEGYPVA AVEQLFAHHR
TLSDLAAAHG CSPHLMAPLL ARLGVRPLIA EKGHTRLYAI ADLPPAIRLA EEVAKAQART
ARFKTPQKGA LSQE