| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0070 |
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| Symbol | yccV |
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| ID | 5711692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 70719 |
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| End bp | 71045 |
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| Gene Length | 327 bp |
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| Protein Length | 108 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641265964 |
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| Product | hemimethylated DNA binding protein |
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| Protein accession | YP_001531420 |
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| Protein GI | 159042626 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3785] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02097] hemimethylated DNA binding domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00195677 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCTCAAGG CACAGGCAAA ATACAATCTC GGACAGGTGG TTCGGCACCG GAAGCATCCC
TTCCGGGGCG TGGTCTTTGA TATAGACCCC GAATTTTCCA ATACCGAGGA ATGGTACGAC
GCCATCCCCG AAGACAGCCG TCCGCGGAAG GACCAGCCCT TCTATCACCT GCTCGCCGAG
AACGACCAGA GCTATTACGT GGCTTATGTG TCGGAGCAGA ACCTGGTGGT GGATGCCGCC
GGCGGTCCGG TCGATCACCC GGATGTCCCG GACCTGTTCG GGGATTTCGA CGGGCGGCAA
TACCCGCTGC ATTTCCAGAT GAACTGA
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| Protein sequence | MLKAQAKYNL GQVVRHRKHP FRGVVFDIDP EFSNTEEWYD AIPEDSRPRK DQPFYHLLAE
NDQSYYVAYV SEQNLVVDAA GGPVDHPDVP DLFGDFDGRQ YPLHFQMN
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