| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0069 |
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| Symbol | |
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| ID | 5711691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 69751 |
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| End bp | 70632 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641265963 |
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| Product | auxin efflux carrier |
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| Protein accession | YP_001531419 |
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| Protein GI | 159042625 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00130998 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAACTTGC TCCTGACAGT TCTGAACATC GTCGCACCTG TTTTCCTGCT CGCGGGGCTC
GGGTTTGGCT GGGTGCGCCT GGGCTGGGAC TACCCCTTGG AATTCGTCAC GCGCATGGGC
ATGACCCTCG CGGTGCCCTG CCTGATCTTC ACCGCCCTGA TGCAGACCGA GATCGACCCG
GCAGCCCTGA GCACCGTGTC CCTGGCGACC CTGTCGGCCT ATATCGCGAT CACCGTGGTC
TTCTCGATCT ACATCCGGGC GGTGGGGGAT CGGCAGCGCG ACTATCTCGC CCCCCTGACC
TTCGGCAACA CCGGCAATCT CGGCCTGCCG CTGGCGCTCT TCGCCTTCGG CGAGACCGGG
CTGAGCTACG GCGTCGTCGT CTTCGCGGCC ATGGCGATCT ATTCCTTCAC TTTCGGCACC
TGGGTGGTCG CGGGCGGCGG CTCCCTGCGC AAGGTCATTC AGGAACCCAT GGTTGCCGCC
ACCCTGCTCG GCGCGCTGTT TCTCTGGCAG GGCTGGCAGA CACCGGTGTT CCTGACCAAC
GCACTGGAGC TGATCGGCCA GCTTGCGATC CCGCTGATGC TGATCACTCT GGGCGTCGCC
ATCGCCGGGC TACGGCCCGG ACGCATCGGC AAGGCACTGT GGCTGTCGGT GTTCAAGCTG
GTGGTCTGCG TCGGCATAAG CTGGACCATC GGCCGCGCCT TCGCGCTGGA GCCCGTGGCC
TTCGGGGTGC TCGTGCTGCA GGTCAGCACC CCGGTCGCGG TTACAAGCTA CCTGATGGCA
CAGAAATACC GCGCCGATGC CGACGCCGTG GCGGGCCTTG TGGTGGTCTC CACCCTCGTT
TCGGTGGTGG CTTTGCCACT CCTGCTCGCC TTTGTGATCT GA
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| Protein sequence | MNLLLTVLNI VAPVFLLAGL GFGWVRLGWD YPLEFVTRMG MTLAVPCLIF TALMQTEIDP
AALSTVSLAT LSAYIAITVV FSIYIRAVGD RQRDYLAPLT FGNTGNLGLP LALFAFGETG
LSYGVVVFAA MAIYSFTFGT WVVAGGGSLR KVIQEPMVAA TLLGALFLWQ GWQTPVFLTN
ALELIGQLAI PLMLITLGVA IAGLRPGRIG KALWLSVFKL VVCVGISWTI GRAFALEPVA
FGVLVLQVST PVAVTSYLMA QKYRADADAV AGLVVVSTLV SVVALPLLLA FVI
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