Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0065 |
Symbol | |
ID | 5711687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 65978 |
End bp | 67468 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641265959 |
Product | hypothetical protein |
Protein accession | YP_001531415 |
Protein GI | 159042621 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.000443618 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCTTTC CCCTTCTCCG CCGCGCGGGT TTTTCGGCGC TTTCGCTGCT CGTGCTGGGC CTGCCCGCGC CGGCCCTGGC CCTCACCGCG GCACAGGTCT GGGAAGAGAT GCAGCAGATC TCGGAGCGCG GCGGATTGCG CCAGCGCGCC GCGGTTGCCA CCCCCGGCGC CGGTACCCTG ACGCTGGAGG GAGTGACGCT GATCTCCGAA GAGGACGCGC CCCGCGTCAC CACCCTGATC GACCGGCTCA CCTTGCGTGA ACTGGACACG GGCGGGGTCG AGATCGTCTA TCCGCCGCAA CTCCGGATCC TGCTCGAAGA TGACAGCGGC GTCGGCATAG ACCGGGCCGA GCTGCTGCTC GAGACCACCG ACCTCGTCAC CCTGGCCAGC GGTGCACCGG GCGACATGTC CTTCGACACG ACCACCCCGG CGGCGGTCCT GCGGCTGAGC GCGTTCGAGG ATGATGGCAC GGCGGAGGTG TCGGAATTCA CCTGGACCTT CACCGATCTC GCCCTGTCGT CGGCCTATGG CGCAGAAATC GCCGACAGCG CCTTCAGCGT CGCCCAGATG TCCGGCGCCG TCGCGCTCAG CGCGCCCGAG GACGACAGCG CGCTGCGGCT GCAGATCGCG CTGACGGATT ACGCCTTCTC GGACCGGGGC AGTGCGCTGC TGATGTCGCC CACGGCGGAC ACCGCGGCCC TCCTGACCGG GCAGACGCCC TACAGCTTCG AAAGCCGCCA TGCCCGGCTG AGCCTCGCGG TCGGTGGGCA GATCGACGGG GTGGCCGGCG GGGCCGCCCT GTCCACGACC GGCGGCGGCA GCGCGGTCTC CTTCGCCGAT GGACAGGTCT CGGTGGCGTC CCGGGCCCAG GGGCTCGACA TCCAGGCGCT GGTGCCCTCG CTGGCCTCGC CCCTCGATGC CGCCGCCGCG AACATGGCGT TGCAGATCAC CCTGCCCGCC ACCCCCACCG AGGACGTGCG CCCGATCGGG CTGGGCCTGA AGCTACAGGA GCTGACCGTG GACGAAGAGG TCTGGGCGAT GTTCGATCCC GTCGGCCTCC TGCCGCGCAG TCCCGCCACG CTGGAGGTGG ACCTGACCGG CGAAGGGCGC GCCTCCGACG ACCTGCTGGA CCCGCGCGCA GGCGCCCGGA CCATGCTCGA CCTCGACAGC CTCTCGATCA ACCGGCTCGT CCTGGATGCC GCAGGCGCCC GGATCACCGC GGAAGGCGGC TTCGATGTGG ACTTGTCTCG CGGCGGCACC ATGCCCGGCC TGCCCGCGCT GAGCGGCCGC ATCGGCATGA CATCGCGCGG TCTGAACGGC CTTCTGGACA ACCTGGCCGA GCTTGGCCTC CTGCGGCCGT CGGACGTCAT GGGCGCGCGC ATGGTGATCG CCATGCTGAC CACGCCCAGC AACGATCCCG ACACGCTCTC GGCAGAGATC GAGCTGAAAC CCGATGGCGG GCTGGTGGCC AACGGGATGC GCCTGCGCTG A
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Protein sequence | MRFPLLRRAG FSALSLLVLG LPAPALALTA AQVWEEMQQI SERGGLRQRA AVATPGAGTL TLEGVTLISE EDAPRVTTLI DRLTLRELDT GGVEIVYPPQ LRILLEDDSG VGIDRAELLL ETTDLVTLAS GAPGDMSFDT TTPAAVLRLS AFEDDGTAEV SEFTWTFTDL ALSSAYGAEI ADSAFSVAQM SGAVALSAPE DDSALRLQIA LTDYAFSDRG SALLMSPTAD TAALLTGQTP YSFESRHARL SLAVGGQIDG VAGGAALSTT GGGSAVSFAD GQVSVASRAQ GLDIQALVPS LASPLDAAAA NMALQITLPA TPTEDVRPIG LGLKLQELTV DEEVWAMFDP VGLLPRSPAT LEVDLTGEGR ASDDLLDPRA GARTMLDLDS LSINRLVLDA AGARITAEGG FDVDLSRGGT MPGLPALSGR IGMTSRGLNG LLDNLAELGL LRPSDVMGAR MVIAMLTTPS NDPDTLSAEI ELKPDGGLVA NGMRLR
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