| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0064 |
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| Symbol | pmbA |
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| ID | 5711686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 64554 |
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| End bp | 65900 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641265958 |
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| Product | peptidase U62 modulator of DNA gyrase |
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| Protein accession | YP_001531414 |
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| Protein GI | 159042620 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.669376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.000186098 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGCAAG ACCTGTCTGC CCTGACCGAT GCCCTCCTGA GTGCTGCCAA GGCCGCGGGG
GCCGAGGCCG CCGATGCCAT GGCGGTGAAG GGCACCTCGG TGTCCATCGA CGTGCGCGCC
GGTGCCCTCG AACAGGCCGA GCGCTCCGAA GGGATCGATC TCGGCTTGCG GGTCCTGCTG
GGCCAGAAAC AGGCGCTGGT CTCGGCCTCC GATACCTCGG GCGACACGAT CCGCGAGATG
GCCGAACGCG CCGTGGCCAT GGCCGCCGAG GCACCGGACG ACCCCTATAT CGGGCTCGCG
GACCCGGACG CGCTCGCCAC CTCCTGGGAC ATCGACGCGC TGGAGTTGCA AGACCCCAGC
CCGGAGCCGG ACCCCGCCGC GCTCGAGGAC GACGCGCGAC GTGCGGAGGC CGCGGCCCTC
GCCCTGCCGG GCATCAGCCA GGTCCAGTCC GCCAGCGCGG GCTATGGCCG CCGCGCCGTG
CACCTGGCCA CCAGCGACGG GTTTTCGGGC GGCTACGCAC GTACCGACCG TGGGCTCTCT
GCCGTGGCCA TCACCGGCAC GGGCACCGGG ATGGAGCGTG ACTACGCAGG CGAGAGCCGG
ATCTTCCAGG CCGACCTGCC CAGCCCCGAA GAAGTCGGCA AACGCGCCGC CGAACGCACC
CTCGCCCGGG CCGGGGCGCG CAAACCGCCC ACCGGCGCCT TCCCGGTGCT CTACGACGAA
CGGATTTCCA GCGCCCTGAT CGGACACCTG CTGGCCGCGA TCAGCGGCAG CGCCATCGCC
CGCGGCTCCA GCTGGTTGCG CGACGCGCTC GGCACGCAGG TGCTGCCCGC GGGCCTGAGC
CTCGTCGAGG ATCCCCACCG CCCGCGGGCC ACGGGATCAC GTCCCTTCGA TGCCGAGGGC
CTGCCGACCG CGCGTCGACT CATTGTCGAC AACGGGGTGC TGCAGGGCTG GACGCTCGAT
CTGGCCACGG GCCGCAAGCT GGGCCTGCCG AGCACGGCCA ATGCCGCCCG CGGCACCTCC
AGCCCGCCAT CGCCCTCGGT GACCAACGTG GCCCTGACCC AGGGCGACAA GCCCGCCGAA
GCACTCGCAC GGGACATGGG CACCGGGCTC TGGGTGACCT CGATGATCGG CGCCTCGATC
AATCCCACGA CCGGGGATTA CTCCCGCGGG GCCAGCGGCT TCTGGGTCGA GAAGGGCGAG
ATCGCCTACC CGGTGAACGA ATGCACCATC GCGGGTAACC TGCGCGACAT GCTCAAGACC
CTGGTGCCCG GCAACGACGC CCGGCCCCAT CTGAGCCGCG TGATCCCCAG CCTGCTGGTC
GAAGGACTGA CGATTGCCGG CGCCTGA
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| Protein sequence | MPQDLSALTD ALLSAAKAAG AEAADAMAVK GTSVSIDVRA GALEQAERSE GIDLGLRVLL
GQKQALVSAS DTSGDTIREM AERAVAMAAE APDDPYIGLA DPDALATSWD IDALELQDPS
PEPDPAALED DARRAEAAAL ALPGISQVQS ASAGYGRRAV HLATSDGFSG GYARTDRGLS
AVAITGTGTG MERDYAGESR IFQADLPSPE EVGKRAAERT LARAGARKPP TGAFPVLYDE
RISSALIGHL LAAISGSAIA RGSSWLRDAL GTQVLPAGLS LVEDPHRPRA TGSRPFDAEG
LPTARRLIVD NGVLQGWTLD LATGRKLGLP STANAARGTS SPPSPSVTNV ALTQGDKPAE
ALARDMGTGL WVTSMIGASI NPTTGDYSRG ASGFWVEKGE IAYPVNECTI AGNLRDMLKT
LVPGNDARPH LSRVIPSLLV EGLTIAGA
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