| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0057 |
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| Symbol | leuS |
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| ID | 5711679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 53250 |
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| End bp | 55859 |
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| Gene Length | 2610 bp |
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| Protein Length | 869 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641265951 |
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| Product | leucyl-tRNA synthetase |
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| Protein accession | YP_001531407 |
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| Protein GI | 159042613 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0495] Leucyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000000000544837 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCGCCG ACACGCCCGC CGGTTCCGCC CCCGCCCGCT TCGACCCCGC CCAGATCGAG
CCGAAATGGC GCGCCGCCTG GGATCTGGCC GGCACCTTCA CCGCGACCCC GGACCCAGCG
AAGCAGAAAT ACTACGTGCT CGAGATGTTC CCGTATCCCT CGGGCCGCAT CCACATGGGC
CATGTGCGCA ACTACACGAT GGGCGACGTG ATCGCGCGCT ACAAGGCCTC CTGCGGCTTC
TCGGTCCTGC ATCCCATGGG CTGGGACGCC TTCGGCATGC CCGCCGAAAA CGCCGCCATG
GCCACGGGCG GCCACCCCAA GGACTGGACC TACGCCAACA TCGCCGAGAT GCGGGCGCAG
ATGAAACCGC TGGGCCTCAG CATCGACTGG TCGCGCGAAT TCGCCACCTG CGACGAGGCC
TATTACGGCC AGCAACAATC CATGTTTCTC GACTTCCTGG AAAAGGGCCT GGTCTATCGC
AAGAACGCCG TGGTCAACTG GGATCCCGTG GACATGACCG TGCTCGCCAA CGAGCAGGTG
ATCGACGGCA AGGGCTGGCG CTCCGGCGCC GAGGTCGAGC GTCGCGAGCT GACCCAATGG
TTCTTCAAGA TCTCCGACTT CGCCGACGAC CTGCTGAGCG CGCTGGACGG GCTGGAGAAC
TGGCCCGAAA AGGTCCGCCT GATGCAGGCC AACTGGATCG GTAAGAGCCG CGGGCTGGAG
TTTGCCTTCG CGCGCACCGA TGGCGGCGAC CCGATCCCGG TCTACACCAC CCGGCCCGAC
ACCCTGATGG GCGCCAGCTT CGTGGGCATC TCGCCGGGCC ATCCCATCGC CAAGGCGCTC
GCAGCCCAGC GCCCCGAGGT CGCCGATTTC CTGGCCGAGG TCGCGCGCGG CGGCACCACC
GAGGCAGCAC TTGAGACCGC GCCGAAACTC GGCTTCGACA CCGGGATCAC GGTGCGCCAT
CCGCTGGACC CGAACTGGGA GCTCCCAGTC TGGATCGCCA ATTTCATCCT GATGGATTAC
GGCACCGGCG CGATCTTCGC TTGCCCGGCC CATGACCAGC GCGACCTGGA TTTCTGCCGC
AAATACGACC TGCCGGTGAT CGACACCTTC TTCGCTCTCG ACGACCCGAC GCCCGTGGGC
GACACCGCCT TCGTGCCGCC GAAAACCGAA CCCGTCCGCT GGGTCGAGCA TTTCGCCGGG
CTAGACATCG CCACCGGGCA GGAGGCGATC GAGGCCACCA TCGACTTCGC CGAGGCCGCG
GGCTGGGGTC GGGGTGTCGA GCAGTTCCGC CTGCGCGACT GGGGCCTGAG CCGTCAGCGC
TACTGGGGCT GCCCGATCCC GGTCGTCCAT TGCGACAAAT GCGGCGTGGT GCCCGAGCGC
AAGGAAAACT TGCCCATCGC CCTGCCCTAT GACGAAGACG GGCGGCCCAT CGACTTCTCG
ATCCCCGGCA ACCCGCTGGA CCGGCACCCG TCCTGGCGCG ACTGCGCCTG CCCGGCCTGC
GGCGCCCCCG CCCGGCGCGA AACCGACACC ATGGACACCT TCGTCGACAG CTCCTGGTAC
TTCGCCCGCT TCACCGCCCC CCGGGCCGAG ACCCCCACCG ACCCGGCCGA GGTCGGCTAT
TGGATGAACG TGGACCAGTA TATCGGCGGG GTCGAACACG CGATCCTGCA CCTGCTCTAT
TCACGCTTCT TCGCCCGGGC GATGCATCTC TGCGGCCACC TGCCCGAAAG CGCGCGCGAA
CCCTTCGACG CGCTCTTCAC GCAAGGCATG GTGACCCACG CGATCTACAA GACCACCGGC
ACCGATGGCC GCCCGGTCTA TCACTACCCC GAGGAGGTCG AAACGACCGA GGAGGGCGCC
GTCCTGAAAA AGACCGGTGC GCCGGTGGAT ATCGTGCCGT CGGCCAAGAT GTCGAAATCC
AAGAACAACG TGGTCGACCC GCTCGCGATC ATCGACGCCT ACGGGGCCGA TACCGCGCGC
TGGTTCGTGA TGTCCGACAG CCCGCCGGAG CGTGACGTGG AATGGACCGC CTCGGGCGCC
GAGGCCGCCT TCAAGCACCT CGGAAGGGTC TGGCGTCTGG CTGAGGATCT GCGCCGGAAC
GCCGAGGAGG CCGCGACCGC AGGAAGCGCC GAGGAGGCGC GCGCCCTGGC GCGCGCCTCC
GCCCGCGCCA TCGCCGAGGT CACCGCCGGG ATCGAAGGCT TCGCCTTCAA CAAATCCGTG
GCCAAGCTCT ACGAATTCAC CAACACGATC CAGAAATCCA AGGCCCCCCG CGCCGAAAAG
CGCGCTGCCC TGAAAACCAT GGCGCAGCTG ATGTCGCCCA TGACGCCCCA CCTCGCCGAA
GAGGTCTGGT CGATGCTCGG CGGCATCGGC CTGGTGGCCG AGGCGCCCTG GCCCGAAGCC
GACCCGGCGC TGCTCGTCGA AGACACCGTC ACCCTGCCGA TCCAGATCAA CGGCAAGCGC
CGCTCCGAGC TGGCCGTGCC CAAGGACATG CCCCGGGAAG AGGTCGAGAA ACTGGCGCTG
GCGGACGCGG CCGTGCTCAA GGCGCTCGCC GGGGGCGCGC CCCGGAAACT CATCGTCGTG
CCGGGCCGGA TCGTGAATGT CGTCATTTGA
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| Protein sequence | MPADTPAGSA PARFDPAQIE PKWRAAWDLA GTFTATPDPA KQKYYVLEMF PYPSGRIHMG
HVRNYTMGDV IARYKASCGF SVLHPMGWDA FGMPAENAAM ATGGHPKDWT YANIAEMRAQ
MKPLGLSIDW SREFATCDEA YYGQQQSMFL DFLEKGLVYR KNAVVNWDPV DMTVLANEQV
IDGKGWRSGA EVERRELTQW FFKISDFADD LLSALDGLEN WPEKVRLMQA NWIGKSRGLE
FAFARTDGGD PIPVYTTRPD TLMGASFVGI SPGHPIAKAL AAQRPEVADF LAEVARGGTT
EAALETAPKL GFDTGITVRH PLDPNWELPV WIANFILMDY GTGAIFACPA HDQRDLDFCR
KYDLPVIDTF FALDDPTPVG DTAFVPPKTE PVRWVEHFAG LDIATGQEAI EATIDFAEAA
GWGRGVEQFR LRDWGLSRQR YWGCPIPVVH CDKCGVVPER KENLPIALPY DEDGRPIDFS
IPGNPLDRHP SWRDCACPAC GAPARRETDT MDTFVDSSWY FARFTAPRAE TPTDPAEVGY
WMNVDQYIGG VEHAILHLLY SRFFARAMHL CGHLPESARE PFDALFTQGM VTHAIYKTTG
TDGRPVYHYP EEVETTEEGA VLKKTGAPVD IVPSAKMSKS KNNVVDPLAI IDAYGADTAR
WFVMSDSPPE RDVEWTASGA EAAFKHLGRV WRLAEDLRRN AEEAATAGSA EEARALARAS
ARAIAEVTAG IEGFAFNKSV AKLYEFTNTI QKSKAPRAEK RAALKTMAQL MSPMTPHLAE
EVWSMLGGIG LVAEAPWPEA DPALLVEDTV TLPIQINGKR RSELAVPKDM PREEVEKLAL
ADAAVLKALA GGAPRKLIVV PGRIVNVVI
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