Gene Dshi_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0056 
Symbol 
ID5711678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp52769 
End bp53263 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content69% 
IMG OID641265950 
Producthypothetical protein 
Protein accessionYP_001531406 
Protein GI159042612 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000644124 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGTCAT TTGACCGCCG CACCCTCCTG ATCCTGCTGG CGGCGGCACC CCTCGCCGCC 
TGCGGCTTCA CGCCGGTCTA TGCCCCGGGC GCGGAGGCGA CCCGGCTCCG TGGCGCGGTC
CGCATGCCCG ACCCCGAAAC CCCGGACGAA TTCGACATCG TGCGCGAGAT CGAAGCCCGC
CTCGGCCGCC CGGACACCCC GCTTTACGAG CTGACCATCA CCCCCCGCGT GACCGAGGAT
TCCCTCACCC TCGTCGGGGC CCGCGACATC ACCCGATTCA ACCTGATCGG CACCGCGCGT
TACAGCCTGC GCCCCATCGG GTCCGAGACC GACCTTCTTT CGGGCGAGGT CAACAGCCTG
ACCTCCTATT CGGCGACCGG CACCACGGTC AGCACGCTCT CGGCCGAACG CGACGCCCGC
AGCCGCCTGA TGATCATCCT CGCCGACCTG GTCGTCACCC GGCTTCTGGC CAATGCCGAC
AGCCTGCCGC AATGA
 
Protein sequence
MSSFDRRTLL ILLAAAPLAA CGFTPVYAPG AEATRLRGAV RMPDPETPDE FDIVREIEAR 
LGRPDTPLYE LTITPRVTED SLTLVGARDI TRFNLIGTAR YSLRPIGSET DLLSGEVNSL
TSYSATGTTV STLSAERDAR SRLMIILADL VVTRLLANAD SLPQ