| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0053 |
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| Symbol | |
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| ID | 5711675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 49943 |
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| End bp | 51163 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641265947 |
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| Product | HI0933 family protein |
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| Protein accession | YP_001531403 |
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| Protein GI | 159042609 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2081] Predicted flavoproteins |
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| TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000000000927745 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAGGTA TCGCCCCCTT GCCCGAGATC GAGACGGATG CGCTGGTCGT GGGGGCCGGT
CCCGCGGGGC TGATGGCCGC CGAGCAGCTG GCGCAGGCGG GGTTTTCCGT GCGTATCGCC
GAGCAGATGC CCAGTGCCGG GCGCAAGTTC CTGATGGCGG GCAAGAGCGG GCTGAACCTG
ACCAAGGATG AAGAGATGCC CGCGTTCCTG GGGGCTTATG GCGGGGCGGC GGCGTGGCTG
GCGCCGATGC TGGAGGCGTT CGGGCCCGAC GCGGTGCAGG ACTGGGCCCG GGGGCTGGGC
CAGCCGGTCT TCACCGGGTC CACGGGGCGG GTGTTTCCCG AGGCGATGAA GGCGTCGCCG
CTGCTCCGCG CGTGGCTGGC GCGGCTGGCG GGCCTGGGCG TGCGGCTCGA CACGCGCTGG
CGCTGTCTCG GGTGGCAGGA CGGGGCGCTG CGGTTCGAGA CGCCCGCGGG GCCGGTGCGG
GTGCGGGCGC GGGCGGTGGT GCTGGGTCTG GGCGGGGCGA GCTGGCGGCG GCTTGGCTCG
GACGGGGCCT GGGCCGGGTG GATCGGGGCC GCGTGCGCGC CGTTCGCCCC GGCGAATGTG
GGGCTGCGGG TGGATTGGAG CCCGCATATG GCGCGCCATT TCGGGGCGCC GGTGAAGGGG
GCCGCGTTGT CGTCGGGCGG GGTGGTGTCG CGCGGCGAGG TCGTGGTCTC GGCCCGGGGG
CTGGAGGGCG GCGGGCTCTA TCCGCTGTGC CCGGCCCTGC GGGAGGGCGC GGGGCTGCGG
GTGGATCTGT GCCCGGACCT GGAGGTCGGG GCGCTGGCCG CGCGGCTGGC CCGGGTGCCG
GCCAAGGCCA GCGGGGCCAG CCGGTTGCGC AAGGGCGCGG GCCTGTCGCC GGTCAAGCAG
GCGCTGGTGC AGGAATGCGC GCGCCCCCTG TCGCGCGATC CGGCGGATTT GGCGCGGGTT
CTCAAGGATT TGGGGGTGCC GCACCAGGGG GTGCGCCCGC TGGACGAGGC GATTTCGGTG
GCCGGGGGTG TCGCGCGCGC GGCGCTGGAC GACCGGTTGA TGCTGCGCGA CCGGCCCGGC
GTGTTCGCCT GCGGCGAGAT GCTGGACTGG GAGGCGCCGA CGGGGGGCTA CCTGCTCACG
GGCTGTTTCG CGACGGGGCG TTGGGCCGGG CTGGGGGCGG TGGACTGGCT GCGGGGTGCT
CAGGCGGCGG CGCGGGCGTA G
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| Protein sequence | MTGIAPLPEI ETDALVVGAG PAGLMAAEQL AQAGFSVRIA EQMPSAGRKF LMAGKSGLNL
TKDEEMPAFL GAYGGAAAWL APMLEAFGPD AVQDWARGLG QPVFTGSTGR VFPEAMKASP
LLRAWLARLA GLGVRLDTRW RCLGWQDGAL RFETPAGPVR VRARAVVLGL GGASWRRLGS
DGAWAGWIGA ACAPFAPANV GLRVDWSPHM ARHFGAPVKG AALSSGGVVS RGEVVVSARG
LEGGGLYPLC PALREGAGLR VDLCPDLEVG ALAARLARVP AKASGASRLR KGAGLSPVKQ
ALVQECARPL SRDPADLARV LKDLGVPHQG VRPLDEAISV AGGVARAALD DRLMLRDRPG
VFACGEMLDW EAPTGGYLLT GCFATGRWAG LGAVDWLRGA QAAARA
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