Gene Dshi_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0046 
Symbol 
ID5711668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp46315 
End bp46704 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content59% 
IMG OID641265940 
Producthypothetical protein 
Protein accessionYP_001531396 
Protein GI159042602 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000196644 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGCGCA GGTACTTCCG CCCCATCCAA GAAGATACGA TTGTCTCCGT GCTGCACTTC 
CTGCGGCAAG AGGCGGTGCG CGATGGGTGC AATACGCTTC CGCACATAGA CGCCCTACTT
GAGATGCGGG GCGTTAACCC CAGCGCGCTT ACCGTTCCGC GCAAGACGCC CAAGGCATTC
AAGAAGGGAG AACTGCGCCG CTTGGTTTTG CAGGCACTGC GCGAAGGGCC GAAGACAGGG
CGTCAGATCG CAGATTATGT TGAGGCGGCA AGATCCGACC TACCGAAGGG CGCTGCATAC
AAGCGCGTGT ATGTTTGTTT AGCGCAGCTT CGGGGGCATG GGATGGTCAA GCGTAAGAAC
GGGGAGTGGT TTGCTGGCGA GTGTGAGTAA
 
Protein sequence
MTRRYFRPIQ EDTIVSVLHF LRQEAVRDGC NTLPHIDALL EMRGVNPSAL TVPRKTPKAF 
KKGELRRLVL QALREGPKTG RQIADYVEAA RSDLPKGAAY KRVYVCLAQL RGHGMVKRKN
GEWFAGECE