Gene Dshi_0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0044 
Symbol 
ID5711666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp45163 
End bp45633 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content68% 
IMG OID641265938 
Producthypothetical protein 
Protein accessionYP_001531394 
Protein GI159042600 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000485186 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGCAAC GTTTCAACAG GTCCGCGTGG CTTGGTCTGC CGGTCGTGTT TCTGACGGCC 
TGCGGTCTGG GGCCGAGTGC GCCGCGGGAC CAGTTGCCGA CCAATATCGA CGATGCGCCC
GGGACCGACA GCACGATCTG GGACCTGTTC GATGCGCGCG ACGATCCCAA CACCACGGTC
GAGGTGAACA AGTATATCTG GGCCGCGGCC CTCGATGTGC TGGATTTCCT GCCGATCGAG
ACGGTGGATC CGTTCACCGG GGTGATCGTG ACCGGGTTCG GCACGGCACC TGGGTCGAGC
CGGGCCTACC GCGCGACGGT CTATGTCCAG GACCCGGCGC TGGATGCGCG GTCGCTGCGG
CTGGCGCTGG CCACGCGGTC GGGGCCTGCG GATCCGGACA CGGTGCTGGC GGTCGAGGAT
GCGATCCTGA CCCGTGCGCG GCAGCTGCGT CTGCAGGACA GTCGTCTCTG A
 
Protein sequence
MAQRFNRSAW LGLPVVFLTA CGLGPSAPRD QLPTNIDDAP GTDSTIWDLF DARDDPNTTV 
EVNKYIWAAA LDVLDFLPIE TVDPFTGVIV TGFGTAPGSS RAYRATVYVQ DPALDARSLR
LALATRSGPA DPDTVLAVED AILTRARQLR LQDSRL