| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0043 |
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| Symbol | |
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| ID | 5711665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 43903 |
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| End bp | 44862 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641265937 |
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| Product | porin |
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| Protein accession | YP_001531393 |
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| Protein GI | 159042599 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000000258159 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAGC TTCTCATCGC TTCTACCGCC CTGGTTGCTA CGTCCGGCTT CGCTTATGCC
GACGTGACAC TCGGCGGCTC CGCCCAGTTC GGCATCATCT ACATCGAAGA CCGCGCTGAT
CCGGTTGACC CGACCGAAGA CGAAGAGCTG TTCCTGGATT ACGAACTCCA GTTCGACTTC
TCCGCTTCCG GCGAAACCGA TGGCGGCCTG GGCTTCGGCA TGAGCGCCGA GCTCGAGTCC
GACTCCGACG CTGAAGGCAA CCAGTTGTCA GACAACAACG TCGACCCGGA AATCTTCATC
ACTTCCGGCT TCGGCACTCT GACCGTTGGT GCGCTCGACA CCGCCCCTGA CCAGGCGGGC
TTCGGCAACA CCCGTGACCC CGGCTACGAC GGCGTTGGCG TTGACAACCT GATCGACGCG
ATCCTGTTCC TGGACGCCGG GGCTCTGTTC AACGCAGACG AAGGCGGCAA GTCCAACATC
ATGTACCAGG GTTCCTTCGG CGGTCTGTCG CTGACGGCAA CGGCCCACGC GCATGAGCAG
GACTTCGGCA TCGTCGCCGA GTACGACTTC GGCGCCTTCC GCGCTGGCCT GTCCTACATG
GAAGTCGACG AAGTTGAAAT CGATGGCGAC CTCGGCGGTG GTGACACCAT CGGTGTGACC
GTTGGCGGCA CCTTCGCAGG CTTTGACCTC GACTTCGTCT ACGCTGATCA CAGCAACGAC
TTCGACGTGG ACGCAGAAGC CTACGGTCTG TCCGGTGCCT ACGACCTCGG CGCCTACGGC
ATCACCTTCG GCGTGAACCA GGTGGAAATC GGCGACGTCG ACGGCACCAC CTACGGTATC
GGTGTCGAGT ATGACCTCGG TGGCGGCGCA GAGCTGCAAG CCGGTGTGGC CTCCCTCTGG
GATCCGGAGG ACGACGACAA CTTCACCACC GCATCCTTCG GGATCGCGAT GTCCTTCTAA
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| Protein sequence | MKKLLIASTA LVATSGFAYA DVTLGGSAQF GIIYIEDRAD PVDPTEDEEL FLDYELQFDF
SASGETDGGL GFGMSAELES DSDAEGNQLS DNNVDPEIFI TSGFGTLTVG ALDTAPDQAG
FGNTRDPGYD GVGVDNLIDA ILFLDAGALF NADEGGKSNI MYQGSFGGLS LTATAHAHEQ
DFGIVAEYDF GAFRAGLSYM EVDEVEIDGD LGGGDTIGVT VGGTFAGFDL DFVYADHSND
FDVDAEAYGL SGAYDLGAYG ITFGVNQVEI GDVDGTTYGI GVEYDLGGGA ELQAGVASLW
DPEDDDNFTT ASFGIAMSF
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