Gene Dshi_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0041 
Symbol 
ID5711663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp42669 
End bp43163 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content73% 
IMG OID641265935 
Producthypothetical protein 
Protein accessionYP_001531391 
Protein GI159042597 
COG category[S] Function unknown 
COG ID[COG3786] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0000155161 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCCCGC GTGACCTTGT ATTGACCCCG ATGGGCCTGC GCTTCGGCGG GCGTGTGCTG 
CCCTGCACGA TCGGGCGGGG CGGGGTGACG GACCGCAAGC GCGAGGGGGA CGGGGCGACG
CCGCGCGGGG TGCATCGGTT GGTGGGGATG TTGTACCGCC CCGACCGGAT GGCGCGGCCC
GCGGATTGGG CGCTGCCGAT CCGGCCGCGG GACGGGTGGT CGGACGACGT GAGGGACCCG
GACTACAACC TGATGGTCAC CCGGCCCCAC GGGTTCGGGC ACGAGCGGTT GTGGCGGGCG
GACCCGCTCT ATGATCTGGT GATCCTGACG GACTGGAACT GGCCCTCTGC GCGCAAGGGG
GCGGGCTCGG CGATCTTCAT CCACCAGTGG CGCGGGCCGG GGCGGGCGAC GGAGGGCTGC
GTGGCCCTGT CGCGCGCGGA CCTGCGCTGG CTGGCGCCGC GCATCCGGTA CGAGACGCGG
CTGATCGTGG TCTAG
 
Protein sequence
MGPRDLVLTP MGLRFGGRVL PCTIGRGGVT DRKREGDGAT PRGVHRLVGM LYRPDRMARP 
ADWALPIRPR DGWSDDVRDP DYNLMVTRPH GFGHERLWRA DPLYDLVILT DWNWPSARKG
AGSAIFIHQW RGPGRATEGC VALSRADLRW LAPRIRYETR LIVV