| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0039 |
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| Symbol | ribA |
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| ID | 5711661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 41277 |
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| End bp | 42347 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641265933 |
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| Product | GTP cyclohydrolase II |
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| Protein accession | YP_001531389 |
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| Protein GI | 159042595 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0807] GTP cyclohydrolase II |
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| TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.000270099 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCCTGA CCCCCGATCC GCGCGAATTG CGCGCCCGTG CCTGGGCGGA CCTGCGCATG
GGCGTGCCCG TGGTGCTGCA TTCCGAGGGC CGTGCGGTGC TGGCGCTGGC GGGCGAGACG
CTCAAGCCTG CGCGATTGTC GGTGGTGGCG GGCATGGCGG AAGCGGTGCT CGCGATCACG
GCGCGGCGGG CCGAGACCCT GCGCGCGGTG CCCTATGACG GGGATATCGC GCGGATCGCC
CTGCCGGGCA ATGCGGATGC GCACTGGGTG CGGGCGGTGG CCGATCCTGC GGATGATCTG
CGGATGCCGA TGAAGGGGCC GTTCCGGGTG CTGCGCGACG GAGACGCAGT GTTGCACCGG
CTGGCGCTGA CCCTGTGCAA GGAAGCGCGG CTCTTGCCTG CGGCGGTGGT CGCGCCCGTG
GTGCCCGGGT TCGGCCCGGC GGAGGGTCTG ACGGTTCTGG ATGCCGCCGA CCTGCGCGTG
CCGATGGTGA TGGACGAGGT CGTCTCGGCC CGCGTGCCGC TGTCGGTGTC GGAGGCGGGG
CGGCTGCATG TGTTCCGGCC CGAGGATGGC AGCGAGGAGC ATTACGCGGT CGAGATCGGC
ACGCCGCCGC GCGACCAGCC GGTGCTGGCG CGGTTGCATT CGGCGTGTTT CACCGGTGAC
CTGCTGGGGT CGCTGAAATG CGATTGCGGG CCGCAATTGC GTGGGGCGCT GGCGCAGATG
GGGGCCGAAG GGGCGGGCGT ATTGCTGTAC CTGAACCAGG AGGGGCGGGG GATCGGGCTG
GCCAACAAGA TGCGCGCCTA TGCCTTGCAG GACCAGGGGT TCGACACGGT GGAGGCGAAC
CACCGGCTGG GCTTCGAGGA TGACGAGCGG GATTTCCGGA TCGGGGCGGA GCTTCTGCGG
CGGCTGGGGT TTTCGGCCAC GCGGCTCATG ACGAACAACC CGGCCAAGGT GGCGATGATG
GAGAATTGCG GGATCGCGGT GACCGAGCGC GTGCCGCTCA AGGTCGGGGA GACGCCGCAG
AACGCCGGGT ACCTCGCGAC CAAGGCGGCG AAGTCGGGGC ATTTGTTGTA G
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| Protein sequence | MSLTPDPREL RARAWADLRM GVPVVLHSEG RAVLALAGET LKPARLSVVA GMAEAVLAIT
ARRAETLRAV PYDGDIARIA LPGNADAHWV RAVADPADDL RMPMKGPFRV LRDGDAVLHR
LALTLCKEAR LLPAAVVAPV VPGFGPAEGL TVLDAADLRV PMVMDEVVSA RVPLSVSEAG
RLHVFRPEDG SEEHYAVEIG TPPRDQPVLA RLHSACFTGD LLGSLKCDCG PQLRGALAQM
GAEGAGVLLY LNQEGRGIGL ANKMRAYALQ DQGFDTVEAN HRLGFEDDER DFRIGAELLR
RLGFSATRLM TNNPAKVAMM ENCGIAVTER VPLKVGETPQ NAGYLATKAA KSGHLL
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