| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0037 |
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| Symbol | |
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| ID | 5711659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 39692 |
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| End bp | 40216 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641265931 |
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| Product | hypothetical protein |
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| Protein accession | YP_001531387 |
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| Protein GI | 159042593 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain
[TIGR02595] PEP-CTERM putative exosortase interaction domain
[TIGR03370] variant PEP-CTERM putative exosortase signal, Roseobacter type |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000472266 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGTAAAC TTCTTCTGAC TTCTCTCGTC GCATTATGTC CAGCGGTTGC TTCGGCGACG
ACGCTTGCGG GCGATACAGT CAACCTGGCT CTTCCCGGTT TCGGCGCCGT AGATGTCGTG
GTGGGCAGCG GAATCGAATT TGATCTCGAC GGCACAACCT TCGACCTGAA TCCAAACGGC
ACCAACAACC TGCTGGTTGT GGACGGGGAC GTTTTCGGGA CCGTGGGGAA CGTCAGCAGT
CTTGTCATCA GCGACATGAA TTTCAACGAC GGGTCCGAGT TGACGGGATT CTTGGTCACG
CAGACCAATC TTGTGAACCT GCAGGTGAGC TTCACGGCAG ACAGCCTGAC CTTCACTTTC
GACCCGAACA CCGACAGCCC GAACGGCATC CTGCTCGAAG GTGCGTATCT GACGCAGCTT
CCCGGGGCGG GCCCTACCCC CGTTCCGCTG CCGGCGACGG CTCCGCTCCT GCTGCTTGCG
GCAGGCGGTC TGGCGGTGAT GCGGCGGCGC AAGGCGCGCG GCTGA
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| Protein sequence | MRKLLLTSLV ALCPAVASAT TLAGDTVNLA LPGFGAVDVV VGSGIEFDLD GTTFDLNPNG
TNNLLVVDGD VFGTVGNVSS LVISDMNFND GSELTGFLVT QTNLVNLQVS FTADSLTFTF
DPNTDSPNGI LLEGAYLTQL PGAGPTPVPL PATAPLLLLA AGGLAVMRRR KARG
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