| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0036 |
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| Symbol | xthA |
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| ID | 5711658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 38563 |
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| End bp | 39351 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641265930 |
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| Product | exodeoxyribonuclease III |
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| Protein accession | YP_001531386 |
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| Protein GI | 159042592 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0708] Exonuclease III |
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| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000572838 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCCATCA CCATCGCCAC CTGGAACATC AACTCCGTCC GCCTGCGGGC CGATCTGGTC
GCGCGCCTGC TGCGCGACGA GGCGCCGGAT GTCCTGTGCC TGCAGGAATG CAAGAGCCCC
GTCGACAAGA TCCCGCTGGA GACCTTCGCC GCCCGCGGCT ACGGCCACAT GGTCGCCCGC
GGCCAGAAGG GCTATAACGG CGTGGCGATC CTGTCCCGCC TGCCCCTCGA AGACGCCGGG
CACCGGGATT TCGTCGGCAA GGGTGACGCC CGCCACGTCG CTGCGCGGCT GGAAAACGGT
CTGACCATCC ACAACTACTA CGTGCCCGCG GGCGGCGACG TGCCCGACCG CGACGTCAAC
GAGAAATTCG GCCACAAGCT CGACTTCCTG GCCGAGATGC GCGCCTGGTT CACCGATACC
GCGCCGGAGA AATCCGTGCT CGTGGGCGAT CTGAACATCG CCCCGCGCGA GGACGACGTC
TGGTCGCACA AGCAACTCCT CAAGGTCGTC AGCCACACCC CCATCGAGGT CGACACCTTC
GAGACCACCC GCGAAGCCGG CAACTGGGTC GACGTCACCC GCGCCGACAT CCCCGAGGGC
CAGCTCTATT CCTGGTGGTC CTACCGCGCC CGCGACTGGT CGGCGGCCGA CAAGGGCCGC
CGCCTCGATC ACGTCTGGGC CAGCGCCGAC ATCGCCGCCG CGGCCCACGG CTCGCGGATC
CTGCGCGAGG TGCGCGGCTG GGACCAGCCC AGCGACCACG CCCCGGTCTT CGCCAGCTTC
GACCTCTGA
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| Protein sequence | MSITIATWNI NSVRLRADLV ARLLRDEAPD VLCLQECKSP VDKIPLETFA ARGYGHMVAR
GQKGYNGVAI LSRLPLEDAG HRDFVGKGDA RHVAARLENG LTIHNYYVPA GGDVPDRDVN
EKFGHKLDFL AEMRAWFTDT APEKSVLVGD LNIAPREDDV WSHKQLLKVV SHTPIEVDTF
ETTREAGNWV DVTRADIPEG QLYSWWSYRA RDWSAADKGR RLDHVWASAD IAAAAHGSRI
LREVRGWDQP SDHAPVFASF DL
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