Gene Dshi_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0023 
SymbolrnhB 
ID5711645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp26998 
End bp27618 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content68% 
IMG OID641265917 
Productribonuclease HII 
Protein accessionYP_001531373 
Protein GI159042579 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0404773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.332013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCC CGCATTTCCA GTTCGAAACC GACCTCGCCG CCCGGGGGTA TCTGCGCATC 
GCCGGGGTGG ACGAGGTCGG GCGCGGCCCC TTGGCCGGGC CGGTGATGGC CGCGGCGGTG
GTGCTGGACC CGGGTGCCAT CCCCGAGGGG CTCAACGATT CCAAGCAGGT GACCGCGAAG
CGGCGGGAGG CGCTGGCCGC GCAGCTGGCG CAGGTGGCCC AGGTCGGTGT CGGGGTGGCG
GAGGTGGCCG AGATCGACCG GCTCAACATC CGCCGCGCGG CGCATCTGGC GATGCTGCGG
GCGTTGGACG CCCTGCCCGC GCCGCCGGAC ATGGCGCTGA TCGACGGGCG CGACCGGCCT
GATGACCTGC CCTGCGCGGC CCATGCGATC ATCAAGGGGG ACACCAAATC CCTGTCCATC
GCCGCCGCGT CCATTGTTGC AAAAGTGGCA CGGGATCGGG TGATGACGGC GCTGGCGGCG
GAATTTCCGG GCTATGGATG GGAGACGAAC GCCGGATACC CGACCCAGGC CCATCGCGCC
GCGCTTCTAG ATATTGGGGT CAGCCCACAT CATAGACGCA GTTTCCGCCC CGTCCACAAT
ATCTTGTATC AAGAAAAATA A
 
Protein sequence
MSRPHFQFET DLAARGYLRI AGVDEVGRGP LAGPVMAAAV VLDPGAIPEG LNDSKQVTAK 
RREALAAQLA QVAQVGVGVA EVAEIDRLNI RRAAHLAMLR ALDALPAPPD MALIDGRDRP
DDLPCAAHAI IKGDTKSLSI AAASIVAKVA RDRVMTALAA EFPGYGWETN AGYPTQAHRA
ALLDIGVSPH HRRSFRPVHN ILYQEK