Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0023 |
Symbol | rnhB |
ID | 5711645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 26998 |
End bp | 27618 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641265917 |
Product | ribonuclease HII |
Protein accession | YP_001531373 |
Protein GI | 159042579 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0404773 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.332013 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGCC CGCATTTCCA GTTCGAAACC GACCTCGCCG CCCGGGGGTA TCTGCGCATC GCCGGGGTGG ACGAGGTCGG GCGCGGCCCC TTGGCCGGGC CGGTGATGGC CGCGGCGGTG GTGCTGGACC CGGGTGCCAT CCCCGAGGGG CTCAACGATT CCAAGCAGGT GACCGCGAAG CGGCGGGAGG CGCTGGCCGC GCAGCTGGCG CAGGTGGCCC AGGTCGGTGT CGGGGTGGCG GAGGTGGCCG AGATCGACCG GCTCAACATC CGCCGCGCGG CGCATCTGGC GATGCTGCGG GCGTTGGACG CCCTGCCCGC GCCGCCGGAC ATGGCGCTGA TCGACGGGCG CGACCGGCCT GATGACCTGC CCTGCGCGGC CCATGCGATC ATCAAGGGGG ACACCAAATC CCTGTCCATC GCCGCCGCGT CCATTGTTGC AAAAGTGGCA CGGGATCGGG TGATGACGGC GCTGGCGGCG GAATTTCCGG GCTATGGATG GGAGACGAAC GCCGGATACC CGACCCAGGC CCATCGCGCC GCGCTTCTAG ATATTGGGGT CAGCCCACAT CATAGACGCA GTTTCCGCCC CGTCCACAAT ATCTTGTATC AAGAAAAATA A
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Protein sequence | MSRPHFQFET DLAARGYLRI AGVDEVGRGP LAGPVMAAAV VLDPGAIPEG LNDSKQVTAK RREALAAQLA QVAQVGVGVA EVAEIDRLNI RRAAHLAMLR ALDALPAPPD MALIDGRDRP DDLPCAAHAI IKGDTKSLSI AAASIVAKVA RDRVMTALAA EFPGYGWETN AGYPTQAHRA ALLDIGVSPH HRRSFRPVHN ILYQEK
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