| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0019 |
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| Symbol | |
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| ID | 5711597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 22866 |
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| End bp | 24683 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641265913 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_001531369 |
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| Protein GI | 159042575 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.664015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.72367 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTTC GCAATATTGC GATCATCGCA CACGTGGACC ACGGCAAGAC CACCCTCGTG
GACGAGCTTC TCAAGCAATC CGGCACCTAT CGCGACAACC AGGCCACCAC CGAGCGGGCG
ATGGACAGCA ACGATCTCGA ACGCGAGCGC GGCATCACCA TCCTGGCCAA GGCCACCTCG
GTGGAATGGA AGGGCACCCG GATCAACATC GTCGACACCC CCGGCCACGC CGATTTCGGC
GGGGAGGTGG AGCGGATCCT GTCCATGGTC GACGGGGTCG TGTTGCTGGT CGATGCCGCA
GAAGGCCCGA TGCCACAGAC CAAGTTCGTC ACCTCCAAGG CGCTGGCACT GGGGCTGCGG
CCCATCGTGG TGCTCAACAA GGTCGACAAG CCCGATGCGG AGCCCGACCG GGCGCTGGAC
GAGTGCTTCG ATCTTTTCGC CAATCTCGAC GCCGATGACG ACCAACTGGA CTTTCCCCAT
CTCTACGCCT CGGGCCGCTC CGGCTGGGCC GATGCGGAGC TGGACGGGCC GCGCAAGGAT
CTCGCCGCCC TGTTCGACCT GATCGTGCAC CACGTGCCCA AGCCCCGGCA GATCGCCCAT
CTGGACGAGG ATTTCCGCAT GCTGGCCACC ACGCTCAGCG CGGATCCCTT CGTGGGCCGC
ATCCTGACGG GCCGGGTCGA GAGCGGCACG CTCAAGGTCG GGGCCACCGT GCAGGCCCTG
TCCCGCATCG GCCAGAAGAT CGAGCAGTTC CGCGTCACCA AGATCCGCGC CTTCCGCGGC
CTGGGCCACG CGGATATCGA GGAAGCCCAG GCGGGCGACA TCGTGTCGAT CGCGGGCATG
TCCAAGGCCA CCGTGGCCGA CACGATCTGT GCGCTCGCCG TGGACACGCC GCTCGATGCG
CAACCGATCG ACCCGCCCAC CATCACCGTC ACCTTCGGGA TCAATGACAG CCCGCTTGCC
GGGCGCGATG GCAAGAAGGT GCAGTCGCGG GTGATCCGCG ACCGGCTGAT GAAGGAAGCC
GAATCCAACG TCGCCATCAA GATCGCCGAC ACGCCCGGCG GCGAGGCCTT CGAGGTCTCG
GGCCGGGGCG AGTTGCAGAT GGGCGTGCTG ATCGAGAACA TGCGCCGGGA GGGGTTCGAG
CTCAGCATCT CCCGCCCGCA GGTGATCATG CGCGAGGTCG ACGGCGTGAA GATGGAGCCG
ATCGAGGAAG CCACCATCGA CGTGGACGAC GAGTATTCCG GCACGGTGAT CGAAAAGCTG
ACCGGCGCGC GCAAGGGCGA TCTGGTCGAG ATGAAACCGG CCGGCGCGGG CAAGACCCGG
ATCGTGGCCC ATGTGCCCTC GCGCGGGCTG ATCGGCTACC ATGGCGAGTT CCTGACCGAC
ACCCGCGGCA CCGGGGTGCT GAACCGGGTG TTCCACGACT GGGCGCCCTA CAAGGGGCCG
ATCCCGGGCC GCCGGGCGGG CGTGCTGATC TCGATGGAGA ACGGCACATC GGTGGCTTAT
GCCCTGTGGA ACCTCGAAGA GCGGGGCCGG ATGTTCATCG GCGCCCAGGA GGCGGTCTAT
ACCGGCATGA TCATCGGGGA GCACAGCCGG GAAAACGACC TGGAGGTGAA CCCGCTGAAG
GGCAAGAAGC TCACCAACGT GCGGGCCTCG GGTACCGATG ACGCGGTGCG GCTGACCACG
CCGATCACCC TGAGCCTGGA AGAGGCCATC GCCTATATCG ACGATGACGA ACTGGTCGAG
GTGACACCGA ACGCGATCCG GCTGCGCAAG CGGTACCTGG ACCCGCATGA GCGCAAGCGC
CAGGCGCGCG CGGGCTGA
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| Protein sequence | MDLRNIAIIA HVDHGKTTLV DELLKQSGTY RDNQATTERA MDSNDLERER GITILAKATS
VEWKGTRINI VDTPGHADFG GEVERILSMV DGVVLLVDAA EGPMPQTKFV TSKALALGLR
PIVVLNKVDK PDAEPDRALD ECFDLFANLD ADDDQLDFPH LYASGRSGWA DAELDGPRKD
LAALFDLIVH HVPKPRQIAH LDEDFRMLAT TLSADPFVGR ILTGRVESGT LKVGATVQAL
SRIGQKIEQF RVTKIRAFRG LGHADIEEAQ AGDIVSIAGM SKATVADTIC ALAVDTPLDA
QPIDPPTITV TFGINDSPLA GRDGKKVQSR VIRDRLMKEA ESNVAIKIAD TPGGEAFEVS
GRGELQMGVL IENMRREGFE LSISRPQVIM REVDGVKMEP IEEATIDVDD EYSGTVIEKL
TGARKGDLVE MKPAGAGKTR IVAHVPSRGL IGYHGEFLTD TRGTGVLNRV FHDWAPYKGP
IPGRRAGVLI SMENGTSVAY ALWNLEERGR MFIGAQEAVY TGMIIGEHSR ENDLEVNPLK
GKKLTNVRAS GTDDAVRLTT PITLSLEEAI AYIDDDELVE VTPNAIRLRK RYLDPHERKR
QARAG
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