Gene Dshi_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0017 
Symbol 
ID5711595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp19516 
End bp20166 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content71% 
IMG OID641265911 
Producthypothetical protein 
Protein accessionYP_001531367 
Protein GI159042573 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.490701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAC ACACCCCCCA TGCCGCCTTG GCGCGGCAAC CCGGCTTTCT TGCCCTGCTC 
GCCTGGATCG GCGTGATCGG CGTCGGCGCC CTGCTGACCG GGACGGTGAT CGGCCCGCTC
TTTGTGCCCG CCCATGACCC CATGGCCGAC ACAATCAGCG ATCTTGCCGC CGGACGTGGC
GAGATCATCA TGGATGTGGC CCTCTACGGC TTCGCGGCGG GGCTGTTTGC CCTGGCCCTG
GCCTGCGCCC ATGTCCACCA GGGGGGGCTT GCGTGGTCCG CGGGCACGCT CTGCCTCGCG
GTCCTGGCGG CGACGATCGT GGTGGTGGGC GCGCGCAACG AGTATGGCGA CGGCGATGCC
GAGGGCGTGG TGATCCACGA ATACCTCGTC TACGGGCTGG GGGTCCTGTT CACCGCGATG
CCGCTCTGCC TCGCGCCCCG GGCGGCCCGG CTGCTGCCCT GGAGCCGCCC GGCGCTGATC
GGGACGGGCC TGCTCTGGGC GGTGATGTCG CCGGTCTTCT TCCTGCTGCC CACGGATGTG
GATGGCGGCT ACGAGCGGCT GCTGGGGGGC GTGGCCTGCG CGCAGGTGCT GATCCTCGCT
ACGGCCCTCT TCGCTCATGC GCGGCAGGCC CAGCCGGAAC ACGCCCGCTG A
 
Protein sequence
MSAHTPHAAL ARQPGFLALL AWIGVIGVGA LLTGTVIGPL FVPAHDPMAD TISDLAAGRG 
EIIMDVALYG FAAGLFALAL ACAHVHQGGL AWSAGTLCLA VLAATIVVVG ARNEYGDGDA
EGVVIHEYLV YGLGVLFTAM PLCLAPRAAR LLPWSRPALI GTGLLWAVMS PVFFLLPTDV
DGGYERLLGG VACAQVLILA TALFAHARQA QPEHAR