Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0017 |
Symbol | |
ID | 5711595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 19516 |
End bp | 20166 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641265911 |
Product | hypothetical protein |
Protein accession | YP_001531367 |
Protein GI | 159042573 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.490701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCAC ACACCCCCCA TGCCGCCTTG GCGCGGCAAC CCGGCTTTCT TGCCCTGCTC GCCTGGATCG GCGTGATCGG CGTCGGCGCC CTGCTGACCG GGACGGTGAT CGGCCCGCTC TTTGTGCCCG CCCATGACCC CATGGCCGAC ACAATCAGCG ATCTTGCCGC CGGACGTGGC GAGATCATCA TGGATGTGGC CCTCTACGGC TTCGCGGCGG GGCTGTTTGC CCTGGCCCTG GCCTGCGCCC ATGTCCACCA GGGGGGGCTT GCGTGGTCCG CGGGCACGCT CTGCCTCGCG GTCCTGGCGG CGACGATCGT GGTGGTGGGC GCGCGCAACG AGTATGGCGA CGGCGATGCC GAGGGCGTGG TGATCCACGA ATACCTCGTC TACGGGCTGG GGGTCCTGTT CACCGCGATG CCGCTCTGCC TCGCGCCCCG GGCGGCCCGG CTGCTGCCCT GGAGCCGCCC GGCGCTGATC GGGACGGGCC TGCTCTGGGC GGTGATGTCG CCGGTCTTCT TCCTGCTGCC CACGGATGTG GATGGCGGCT ACGAGCGGCT GCTGGGGGGC GTGGCCTGCG CGCAGGTGCT GATCCTCGCT ACGGCCCTCT TCGCTCATGC GCGGCAGGCC CAGCCGGAAC ACGCCCGCTG A
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Protein sequence | MSAHTPHAAL ARQPGFLALL AWIGVIGVGA LLTGTVIGPL FVPAHDPMAD TISDLAAGRG EIIMDVALYG FAAGLFALAL ACAHVHQGGL AWSAGTLCLA VLAATIVVVG ARNEYGDGDA EGVVIHEYLV YGLGVLFTAM PLCLAPRAAR LLPWSRPALI GTGLLWAVMS PVFFLLPTDV DGGYERLLGG VACAQVLILA TALFAHARQA QPEHAR
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