Gene Dshi_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0008 
Symbol 
ID5711760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp10683 
End bp11255 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content51% 
IMG OID641265902 
Producthypothetical protein 
Protein accessionYP_001531358 
Protein GI159042564 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCAATA GACTTCTCGG AATACTCCTC AGCGCCGTAG TTTATACGTT GCCCGCTCAT 
GCATGGTTCT TCCAGCCTCC GCCAGGATCG GTTTCGGAGG AGACGCTGGC ACGCTTTCAA
GAAGCGGCAG TAAATACTCT CGAAGGTTTG GCGCTAATCC ACCAAGTGCT GCTACAAATT
GAGCAGGCTG AGACGAGCGT TAACTCCTTA GAAGCAACTT CTGCTGCGAT AGAGAGGCTT
ACTTCAGCTG CGGAACTGTT TCAGGATTTG CAGACAGACG ACTTACAGGC ACTCGTCGTG
TCAATAGAGG CCGTCGCACA AATCGATGAG GGTGCTATCC AGCTGGTAAG GAACGCGGAG
ATCGAGACTG CAGCCGATCT CGCGCGCTAT TCTAGTGACC AAAGTTTGGC ACTAGCTGAA
TTGATGGGTA GGCTTCAGGA AATTGACTTT GGCCCGGACG CCGCTGCAAA TTCTGAAGGT
CGCACGACAG TAAATCGAGT CGTCTCGAAC ATCTCCACTA TGATGATCGT TGTAAATTCT
GTGTCCGGTG CGCTAGCGTT GGAAACGCAA TAA
 
Protein sequence
MRNRLLGILL SAVVYTLPAH AWFFQPPPGS VSEETLARFQ EAAVNTLEGL ALIHQVLLQI 
EQAETSVNSL EATSAAIERL TSAAELFQDL QTDDLQALVV SIEAVAQIDE GAIQLVRNAE
IETAADLARY SSDQSLALAE LMGRLQEIDF GPDAAANSEG RTTVNRVVSN ISTMMIVVNS
VSGALALETQ