Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_3235 |
Symbol | |
ID | 5696098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 3878941 |
End bp | 3879732 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641265855 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001531115 |
Protein GI | 158523245 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00328629 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCCTG CCCCGAAAAC CGGAAAGATA AGGGTAACGA TCCTGGGTTC CGGCACCTGC GTGCCCTCGC TTACGCGAAG CGCCTGCGCC GTGCTGGTGG AAATTGCCGG GGCAAAAGTC GTGTTTGACT GCGGGCCGGG CACCATGCGG CGGCTGCTGG AAACCGGCAC AGGCATTCAT GATGTTTCCC ACCTCTTTTT TTCCCACTTT CATCCGGACC ACACCGGTGA GATGGCCACC TTTCTGTTTG CCGGCAAATA TTCCCCCGGC CCCCGGCGGA CGCGTCCCAT GGTGATGGCT GGCGGCACCG GCTTTGCCCG GTTTTACGAG GCCTTTAAAG GGGTCTATGG CGAGTGGATT GAATGGGCCG ACGACCTGCT GGTGATTGAG GAATTTGACA CAACCGGCCC GGACACCCGG AGCTATGACG GGTTTTTTCT GACCACACGG CCGGTGCCCC ACCGGCCGGA GAGCATTGCC TTCCGCCTGG AGGCCGGCGG CGTGTCCGTG GTCTACTCCG GCGATACCGA CGTAAGCGAC AGCCTGATAA CACTTGCAAA AAACGCGGAT CTGATGATAT GTGAATCAGC GTTGCCCGAC GGGTGGAAGG TGGACGGCCA CCTGACCCCC TCCCTGGCCG GCGAAATGGC CCAAAAGGCC GGCGTCAGGC GCCTGGTGCT GACCCACCTC TATCCGATGT GCGACATGGT GGACATCGTC AGCCAGTGCC GGTCCGCCTA TGACGGAGAC GTGCAAGTGG CCGAAGACCT GATGCGAATC GAGGTACCAT GA
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Protein sequence | MTPAPKTGKI RVTILGSGTC VPSLTRSACA VLVEIAGAKV VFDCGPGTMR RLLETGTGIH DVSHLFFSHF HPDHTGEMAT FLFAGKYSPG PRRTRPMVMA GGTGFARFYE AFKGVYGEWI EWADDLLVIE EFDTTGPDTR SYDGFFLTTR PVPHRPESIA FRLEAGGVSV VYSGDTDVSD SLITLAKNAD LMICESALPD GWKVDGHLTP SLAGEMAQKA GVRRLVLTHL YPMCDMVDIV SQCRSAYDGD VQVAEDLMRI EVP
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