Gene Dole_3214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_3214 
Symbol 
ID5696076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3851895 
End bp3852545 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content60% 
IMG OID641265833 
Productsporulation domain-containing protein 
Protein accessionYP_001531094 
Protein GI158523224 
COG category[S] Function unknown 
COG ID[COG3147] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTTAA ACAGGAAAAA ACGCACATCC GGCAGAAAGC GGTTCTCCAT TGAGATGTCC 
GGCGGTGAAC TTTTCGGCTG GACCGGCCTG CTGCTGGTGG TGTGCCTCTG GTTTTTCGTT
TTGGGCCTGC TGGTGGGCCG GGGATGGGTA CCGGTGCCGG GCGTCGGTTC ACCGTTAAAA
AAAGAGCTGG CTCAGGCTCG GGAAAACACC TTGGCACAGA AAGCAGCCGA GGCCCAGGTC
CGCCTCGATT TTCACGAGGC CCTGAAAACA GACGACCCCC GGCCCCCGGA AGGCCCCGCC
GTCCTGGCAC CGGCTACGGT CAAGCCGTCG TCCCCTCCTG TGCCGGCTCC CACAGCCGCT
CCCCCTGAAG CCAAAAAGGC TCCCTCTTCT GAAAAACCGG TTCCAGCCGA CACAGACAGC
AAAATATTCA CCATTCAGGT GGCTGCGGTA AAAGATGCCG AAGCCGCCCG GGACCTGATC
GAAACGCTGA AAAAAAAGGG ATTTGACGCC TACATCACAC AGGCTGAACT GGCCGGCGGT
ATTGTCTGGC ACCGCATTCG GTGCGGCGCC TTTGAAAACC GCGAAGCGGC ATCCCCGCTG
CTCTCCCGCC TCAAGGACGC GGGATATGGC CCCATGCTGG TAAGACGGTA A
 
Protein sequence
MALNRKKRTS GRKRFSIEMS GGELFGWTGL LLVVCLWFFV LGLLVGRGWV PVPGVGSPLK 
KELAQARENT LAQKAAEAQV RLDFHEALKT DDPRPPEGPA VLAPATVKPS SPPVPAPTAA
PPEAKKAPSS EKPVPADTDS KIFTIQVAAV KDAEAARDLI ETLKKKGFDA YITQAELAGG
IVWHRIRCGA FENREAASPL LSRLKDAGYG PMLVRR