| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3209 |
|---|
| Symbol | |
|---|
| ID | 5696071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 3845848 |
|---|
| End bp | 3847218 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641265828 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001531089 |
|---|
| Protein GI | 158523219 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1322] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000788974 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATATTC CGGAAATCAT CTACAGTGCG GCCGCCGGCG CCCTTGCCGG CATTTTTTTC
ACCTGGCTGG TCATGCGGGC CCGCCGGGCT GTGCTGGCCG ACCGGCTGGC GAGTGCCACC
ACTGAAATTG AAACCACCAG AACCGAGCGG GATGCTTTGC GCGGCGAGCT GTCCGACCAC
TCGGCCCGGT TCGCCCGGCT TGAATCGGCC CTGGAGCAGG AGCGGGAAAA ATCAAAAGAG
ATGGCCGCCT TTGCCCAGGC CGCCACGCAA ACCCTGAAGG ACACCTTCAA GGGGCTTTCC
GCCGACACCC TGGCCCAGAG CAGCGAGCAG TTTCTGCACC TGGCCAAAAG CGCGTTTGAG
TCCTTTCACG TCAAGGCGTC CGGTGATCTG GCCCAGCGGC AGAAGGCCGT GGAAGAGATT
GTCCGGCCGG TAAAAGAGGC CCTGGACAAG GTCAACACCC AGGTGGCCGA GGTGGAAAAG
AGCCGCAAGC AGGCCTACGG GTCGCTGACC GCCACGGTGG AGTCCCTGCT GCGCGGCCAG
AAGGAGCTTT CCACGGAAAC CGGCAACCTG GTCTCGGCCC TGCGCAAGCC CATGGTGCGG
GGCCGGTGGG GCGAGATCCA GCTGCGCCGG GTGGTGGAGT TTGCCGGCAT GCTGCCCCAC
TGCGACTTTG TGGAGCAGAG TTCGGTGAAG ACCGAAACCG GCACCCTGCG GCCCGACATG
CTGGTCCGCC TGCCCGGCGG CAAGCTGGTG GTGGTGGATT CAAAGGCCCC GCTGGAGGCC
TATCTTTCGG CGGTCAGCGC CGAAGACGAG GCCACGCGCA AAAAATTCAT GGCCGACCAC
ACCCGGCACC TGCGCACCCA TATTCAGCAA CTGTCGGACA AGGCCTACTG GGAGCAGTTT
GACCAGGCCC CGGATTTCGT GGTGCTGTTC CTGCCGGGCG AACCCTTTTT CAGCGCGGCC
CTGGAGCAGG ACGAAGGGCT CATTGAGTTC GCCGTGGCCC GCCGCATCAT TCTGGCCTCC
CCCACCACCC TGATCACCCT GCTTCAGGCG GTCTCCTACG GCTGGCAGCA GGAGCAGATC
GCGGAAAACG CCCGCCACAT TCAGGAGCTC GGGGCCGATC TGTACCGGCG GATTTCAAAG
ATGGCCGACC ATTTCGGCAC GGTGGGAAAA TCCCTGGACA GGGCCGTCAA AAGTTACAAC
GATGCCGTGG GCTCCCTGGA GGCCCGGGTC CTGCCCGCGG CCCGCCGCTT TTCCGAGCTG
GACACCAGCA TCAAAAACGA GATTCCCAAG ATCGAGCCGG TGAATGTGGT GTCAAGAGAT
ATCTCCGCTC CGGAGCTGAT TGAACCGCCG GAGGAGGAAG AGGAGACCTG A
|
|---|
| Protein sequence | MHIPEIIYSA AAGALAGIFF TWLVMRARRA VLADRLASAT TEIETTRTER DALRGELSDH
SARFARLESA LEQEREKSKE MAAFAQAATQ TLKDTFKGLS ADTLAQSSEQ FLHLAKSAFE
SFHVKASGDL AQRQKAVEEI VRPVKEALDK VNTQVAEVEK SRKQAYGSLT ATVESLLRGQ
KELSTETGNL VSALRKPMVR GRWGEIQLRR VVEFAGMLPH CDFVEQSSVK TETGTLRPDM
LVRLPGGKLV VVDSKAPLEA YLSAVSAEDE ATRKKFMADH TRHLRTHIQQ LSDKAYWEQF
DQAPDFVVLF LPGEPFFSAA LEQDEGLIEF AVARRIILAS PTTLITLLQA VSYGWQQEQI
AENARHIQEL GADLYRRISK MADHFGTVGK SLDRAVKSYN DAVGSLEARV LPAARRFSEL
DTSIKNEIPK IEPVNVVSRD ISAPELIEPP EEEEET
|
|---|
| |