| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3191 |
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| Symbol | |
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| ID | 5696053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3823134 |
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| End bp | 3824282 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641265810 |
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| Product | 3'-5' exonuclease |
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| Protein accession | YP_001531071 |
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| Protein GI | 158523201 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGATG ACCCCCAGCA GCCCTTCACC TTTGTAAACA CCCCTTCCGG CCTTGCGCAG
GTGGTCCACC GCCTTGAGCG GGTGCCGGTG GTGGCCGTGG ACCTGGAGGC CGACTCCCTG
CACCATTTTA CGGAAAAGGT CTGCCTGATC CAGATCGGCG TAAACGGTGA CGCCTTTTTG
ATCGACCCCC TGGCCCTTTC CGATCTTTCC TCCTTAAAAC CCTTTTTTGC CGATCCCGGC
GTCATAAAGG TGTTGCACGG CGCCGATTAC GATGTCCGGT CCCTTTACCG GGATTTCGGC
ATCACCATCA CCGGCCTGTT TGACAGCGAA ATCGCCAGCC GGTTTCTGGG GGTTCAATCC
ACCGGGCTCA ACGACGTGGT GAACAGGCGG TTCGGCGTCA CCATGGACAA GGGGTGCCGC
AAGCAGGACT GGACCCAGCG GCCCCTGCCG GAAAAGATGC TGAGCTACGC GGCCCTGGAC
GTGCGTTACC TGGTGGACCT TTACCATCAG TTGCAAAATG AGTTGCAGCA GATGGGCCGG
GCCGAATGGG TGGCCGAGGA GTGCGAACTT TTAAGCCGCG TCCGGTACGC AAACGGGGAA
GACACGCCCC TGTTTGTCCG GTTCAAAGGG GCTGGCCGCC TGAGCCGGCG CACCCTGGCC
GTGCTGGAAG CCCTGCTGGT TGCAAGACAG AAGATGGCCC GGAAAAAAGA CCGCCCCCCG
TTCAAGGTCA TGGGCAACGA TGCCCTGCTC AGGCTGGCCC AGGAGCGGCC CCGGAACCGG
AAGGCCCTGG AGGCCATGGG CGTGTTTTCA AAAAAGCAGC TTCCCATGGT GGCCGACGGG
GTCCTGGCCG CTGTTGAACG GGCCATGGTC CTGCCGGACA GTCAACTGCC GGTCTATCCC
CGGACCCGGC AGCCGGCCCT GCCCAGGGCC GCGGCCCGCC GGGTGGAGAT TTTAAAGCAG
TGGCGGGAAA AGGCGGCCAC CCGGCTGTGC CTGGACCCGG GCCTGCTCTT TCCCAAGTCC
CTGGTGACGG CCGTAGCCCA GGAGGGGCCG AAAACCCTGG CCGACCTGGG CCGGGTCGAG
GGCGTGAGAC GGTGGCAGGT CGAGGCCCTG GGGCCGGAAA TGCTGGAGGC TCTTGGTTCG
GGGCGATGA
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| Protein sequence | MADDPQQPFT FVNTPSGLAQ VVHRLERVPV VAVDLEADSL HHFTEKVCLI QIGVNGDAFL
IDPLALSDLS SLKPFFADPG VIKVLHGADY DVRSLYRDFG ITITGLFDSE IASRFLGVQS
TGLNDVVNRR FGVTMDKGCR KQDWTQRPLP EKMLSYAALD VRYLVDLYHQ LQNELQQMGR
AEWVAEECEL LSRVRYANGE DTPLFVRFKG AGRLSRRTLA VLEALLVARQ KMARKKDRPP
FKVMGNDALL RLAQERPRNR KALEAMGVFS KKQLPMVADG VLAAVERAMV LPDSQLPVYP
RTRQPALPRA AARRVEILKQ WREKAATRLC LDPGLLFPKS LVTAVAQEGP KTLADLGRVE
GVRRWQVEAL GPEMLEALGS GR
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