| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3115 |
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| Symbol | |
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| ID | 5695975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3734329 |
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| End bp | 3735183 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641265732 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001530995 |
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| Protein GI | 158523125 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000023055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAGTG TACAGGCCGG ACAGTACGAC AAGGCGGTGG AAGCCTTTAC CCGAGTACTG
GACCTTTCGC CCGACTTTGC TCCGGCTTAC AACAACCGGG CCGCGGCCCG CTGGGATCTG
GGCGATTATG AAGGCGCCGT TGCAGACTAC AACCGGGCAC TGGCCATTAA TCCTGATTTT
CCCGAGTCCT ATAACGGAAG AGGCAAGGCT TTTTGCGACA TGGGCCAGAT GGATAAGGCC
CTGGCCGACC TGGACAGGGC CGTTGAGCTG GCCCCGGATT TTGCCGATGC CTACAACAAT
CGGGGCGTGG CCTTACGAAA AACAGGTGAT TTTATCGGCG CCCTGGCCGA CCACTCCCGG
GCCATTCAGA TGCGGCCGGA CCGGGCCGCC GAGTTTTACA ACGCCAGGGG CGTGACCTGG
CTGGAAAAGG GAGATCCAGA TAAGGCCATT GCCGACTTTA CCGCGGCTCT TGCCGAAAAT
CCGGGGTTTG CCTGGGCGTA TAACAACCTG GCTTCGGCAT GGATGGAGAA GGGGCAGCCG
GACCGGGCCA TGGCCGCCTA TGACAAGGCC CTTTCGATTT TTCCCCGCAT GGCCGAGGCC
TTAAGCGGCC GGGGATCGGT CCGCGCCCAG GCTGGTGACT ACACCGGGGC ACTGGCCGAT
CTGGACAAGG CCATCGAATT TTATCCCAGC TACCATACCG CTTATTATAA CCGTGCCCGG
GTGTATCAGC TGACCGGAAA CCGGGAAAAG GCCCTGGCCA ACGCGGTCAA GGCGGTGGGC
CTTTTTCCGA ATAATCCCCT TTATCAGGAC CTGCTGAACA TACTGGAGCA GCCGGCTTCC
GCCCCCGGAG AGTAA
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| Protein sequence | MASVQAGQYD KAVEAFTRVL DLSPDFAPAY NNRAAARWDL GDYEGAVADY NRALAINPDF
PESYNGRGKA FCDMGQMDKA LADLDRAVEL APDFADAYNN RGVALRKTGD FIGALADHSR
AIQMRPDRAA EFYNARGVTW LEKGDPDKAI ADFTAALAEN PGFAWAYNNL ASAWMEKGQP
DRAMAAYDKA LSIFPRMAEA LSGRGSVRAQ AGDYTGALAD LDKAIEFYPS YHTAYYNRAR
VYQLTGNREK ALANAVKAVG LFPNNPLYQD LLNILEQPAS APGE
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