| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3062 |
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| Symbol | |
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| ID | 5695922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 3669403 |
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| End bp | 3670941 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641265679 |
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| Product | uroporphyrin-III C-methyltransferase |
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| Protein accession | YP_001530942 |
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| Protein GI | 158523072 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00105684 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCATA GCATGAAAGG AAAAGTTTAC CTGGTGGGGG CGGGCCCCGG TGATCCGGCA
CTGATAACCC TTCGCGGACT CGAGTGCATT CGCATGGCCG ATGTGGTGGT CTACGACTAC
CTGGCCGCCG ACCAGCTCCT GCACCACCGG TCGGAAAACG CCGAAGTCAT CTACGTGGGA
AAAAAAGGCG GGGACCATAC CCTTTCCCAG AACAAGATCA ACGATCTGAT AGTGGAGAAG
GCGGAACAGG GGCTGGTGGT GACCCGGCTC AAGGGCGGGG ACCCCTTTAT ATTCGGTCGC
GGCGGTGAAG AGGCGGAAAT CCTGGCCGCC CGCAACATTC CCTTTGAAAT CGTGCCCGGC
GTGACCTCGG CCATCGCGGC CCCGGCCTAT GCCGGTATTC CCCTGACCCA CCGGGAGCAT
ACCACGTCGG TTTCCTTTAT CACCGGCCAT GAAGATCCCA CCAAGGAACA GTCCACCATT
CACTGGCAGG CCCTGGCCGA GACCGGCGGC ACCCTGGTGT TCCTGATGGG GGTAAAGAAC
CTCTCTTTTA TCGTGGACCG GTTGATGGAA CACGGCCGGC CGGGAACCAC ACCCGCGGCC
CTGGTACGAT GGGGCACCAC GCCCATGCAG CAGACCGTGA CCGGCACCCT TGACACCATC
GTGGACAGGG TAAAGGCCGC CGGGCTTCAG GCCCCGTGCA TCATTGTCAT CGGCGGGGTG
GTGAACCTGA GAGAGACCAT TGCCTGGTTT GAAGCCTCCC GGCCCCTTCT GGGAAAGACC
ATTGTGGTGA CCCGAGCCCG GGCCCAGGCC AGTGATTTTA TCGCGGCGCT TTCGCGCCTG
GGCGCGGCCT GTATTGAGTG TCCCACCATT CGAGTGGCCC CGCCCGACGA TACCGCACCT
CTGGACACGG CCATCGACAA CCTGGCCGCC TATGACTGGC TGGTCTTTAC CAGCGTCAAC
GGGGTGGACC GTTTCTTTGC CCGGCTGTTT GAAAAAGGTG GAGATGTGCG ACGCCTGGGG
CATCTTAAAA CCGCGGTCAT CGGACCGGCC ACGGAACAGC GGCTTCTGGA TTTCGGCGTA
AAAAGCGATA TCGTGCCGGA AAGCTTTCGG GCCGAATCGG TGGTGGAGGC ATTTACCCGG
CAGGACGTGA AAGGCAAAAG CGTACTGCTG CCCAGGGCCG CCGAGGCCCG GCCCATTCTT
CCCGAAGAAC TGACGAAGAT GGGGGCACGG GTGGACGAGG TGGCAGCCTA TGTGACACGG
CAGGACGATT CCGCGGCCAA AACCCTTACA GAAGCTCTGG AGAGCGGGGC CGTCGACATG
GTCACCTTTA CCAGCTCCTC TACGGTTAAA AACTTCAAGG CCCTGCTGCC AAAGGACAAG
TCCACGGCAG ACCGGCTGAT AAAGAATGTG GCGGTGGCTT CCATCGGCCC CATCACCACG
GAAACCGCGA AAGACGAGGG CTTTGCGGTT CATGTCACCG CGGACGCTTA TACGATAGAA
GGCCTGACCC GGGCCATCAT CGACTATTTT AAGGCATAA
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| Protein sequence | MAHSMKGKVY LVGAGPGDPA LITLRGLECI RMADVVVYDY LAADQLLHHR SENAEVIYVG
KKGGDHTLSQ NKINDLIVEK AEQGLVVTRL KGGDPFIFGR GGEEAEILAA RNIPFEIVPG
VTSAIAAPAY AGIPLTHREH TTSVSFITGH EDPTKEQSTI HWQALAETGG TLVFLMGVKN
LSFIVDRLME HGRPGTTPAA LVRWGTTPMQ QTVTGTLDTI VDRVKAAGLQ APCIIVIGGV
VNLRETIAWF EASRPLLGKT IVVTRARAQA SDFIAALSRL GAACIECPTI RVAPPDDTAP
LDTAIDNLAA YDWLVFTSVN GVDRFFARLF EKGGDVRRLG HLKTAVIGPA TEQRLLDFGV
KSDIVPESFR AESVVEAFTR QDVKGKSVLL PRAAEARPIL PEELTKMGAR VDEVAAYVTR
QDDSAAKTLT EALESGAVDM VTFTSSSTVK NFKALLPKDK STADRLIKNV AVASIGPITT
ETAKDEGFAV HVTADAYTIE GLTRAIIDYF KA
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