Gene Dole_3046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_3046 
Symbol 
ID5695906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3653191 
End bp3653958 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content63% 
IMG OID641265663 
ProductBaf family transcriptional activator 
Protein accessionYP_001530926 
Protein GI158523056 
COG category[K] Transcription 
COG ID[COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor 
TIGRFAM ID[TIGR00671] pantothenate kinase, type III 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGCTGG TCATCGACAT TGGAAACACC AACACTGTTT TCGGCATATT TGAGGATCAG 
AAACTGGTGC GCGACTGGCG CATCCGCACG AAACGCAACA CCACCGAAGA CGAACTCAAC
GTGCTGTTGA CCGGCCTGTT TACCGGATCA TCCGTGGCTC TGGCCGACAT ATCCCGCGCG
GTGATCGCCT CGGTGGTGCC GCCGGTAGAG CGCATCTACA GCGCCTTTTG CAAAAAATAC
CTGCGCTGTA CGCCCCAATG GGTAAGCCCG GCCAACTGCG CGGGCATCAC CATCCGCTAC
GCCAATCCCC AGGAGGTGGG GGCCGACCGC ATCGTCAACG CGGTGGGAGC CCACGCAAAA
TATCAAACCG ACCTGATCGT GGTGGATTTC GGCACAGCCA CCACCTTTGA CCTGGTGTCC
GCGGACGGCG CCTACGAGGG CGGGGTGATC GCCCCTGGCA TCGGCATCTC GGCCGACGCC
CTGTTCAGCC ACGCCTCCAA GCTGCCCCGG GTGGACCTGA TGACCGTGCC GGAAACCGTG
GTGGGAAAAG ACACGGCCGG CAGCATCAAG TCCGGCATTA TCTTCGGTTA TGCCGGCCTG
GTGGACGGCA TTGTCAGCCG CATGATCACG GAGCGGGGCC GGCCCCACAA GGTCATTGCC
ACCGGCGGCC TGGCCCCGCT GATTGCCGGG GTGTCCGCCA CCATCGAAGC GGTGGAGCCC
AACCTTACAC TGGAAGGCCT GCGCATTATC GGTTCTTCGG CGGAGTGA
 
Protein sequence
MLLVIDIGNT NTVFGIFEDQ KLVRDWRIRT KRNTTEDELN VLLTGLFTGS SVALADISRA 
VIASVVPPVE RIYSAFCKKY LRCTPQWVSP ANCAGITIRY ANPQEVGADR IVNAVGAHAK
YQTDLIVVDF GTATTFDLVS ADGAYEGGVI APGIGISADA LFSHASKLPR VDLMTVPETV
VGKDTAGSIK SGIIFGYAGL VDGIVSRMIT ERGRPHKVIA TGGLAPLIAG VSATIEAVEP
NLTLEGLRII GSSAE