Gene Dole_3044 details

Gene Information

• Locus tag: Dole_3044
• ID: 5695904
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 3650358
• End bp: 3652298
• Gene Length: 1941 bp
• Protein Length: 646 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 641265661
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_001530924
• Protein GI: 158523054
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0000897526
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGGAGG ATTCTCCATT GAATCAGTTT TCGAAAAACA TGGCGCTGTG GCTGGTCATC 
ATTCTGGTGA TGGTCATGCT TTACAACATG TTCAATCAGC AGCAGAACCT GGAGCGCACC 
ATCGGCTACA GTGATTTTCT CTACATGGTG GACAACGGCA AGGTCAAGGA TGTGCTGATT 
CAGGGCCAGA CCCTGCGGGC CACCAGTGAC ACCGGTGAGC GGTTCAGTGT TTACATGCCG 
GAAGATCAGG ACCTGATCCC CACCCTGCGG GCCAAGGGCA TCGCCATTGA GGCCAAGCCC 
CCGGCCGAAG CCCCGTGGTT TATCACGGCC CTGATCTCCT GGCTGCCCAT GATCCTGCTG 
ATCGGCATAT GGATCTATTT CATGCGACAG ATGCAGTCCG GCGGCGGCAA GGCCCTCTCC 
TTCGGCAAAA GCCGGGCCCG GCTCCTCTCC GAAGGGGCCA ACAAGGTCAC CTTTGCCGAC 
GTGGCCGGCA TCGACGAAGT CAAAGAAGAA GTGGGCGAAA TCATCGAGTT TCTGCGGGAC 
CCCCAGAAGT TCACCCGGCT GGGGGGCCGT ATTCCCAAGG GCGTGCTGCT GGTGGGCGCG 
CCGGGCACGG GCAAGACCCT GCTGGCAAGG GCCATTGCCG GCGAGGCCGG AGTCCCCTTT 
TTCAGCATCA GCGGCTCGGA TTTTGTCGAG ATGTTCGTGG GCGTGGGTGC CTCCCGGGTC 
CGGGACCTGT TTCTTCAGGG CAAAAAGAAC GCGCCCTGCA TCATCTATAT TGATGAAATC 
GATGCCGTGG GTCGCCACCG CGGGGCCGGC CTGGGCGGCG GGCACGACGA GCGGGAGCAG 
ACCTTGAACC AGCTGCTGGT GGAGATGGAC GGGTTTGAGT CCAACGAGGG CGTGATCCTG 
ATCTCGGCCA CCAACCGTCC GGACGTGCTG GACCCGGCCC TGCTGCGGCC GGGCCGCTTC 
GACCGGCAGG TGGTGGTGCC CCTGCCCGAC ATTCGGGGCC GCCGGGCCAT CCTGGACGTC 
TATATCAAAA AAATTCCCGC GGCCGACGAC GTCAAGGTCA ACAACCTGGC CAAGGGAACC 
CCCGGTTTTT CCGGCGCCGA CCTGGAGAAC CTGGTCAACG AGGCGGCCCT GTTTGCCGCC 
AAGCGCAACA AGGAAAAGGT TGAAATGGTG GACTTTGAAG ACGCCAAGGA CAAGGTGTAC 
ATGGGCCTTG AGCGCAAGTC CAAGGTGATC AAGGAAGAAG ACAAGAAGAT GACCGCCTAC 
CACGAAGGGG GCCATGCCAT CGTGGCCCGG CTCCTTCCCG ACACCGACAC GGTCAACAAG 
ATCACCATCA TTCCAAGGGG GCGGGCCGCC GGCGTCACAT GGTTTCTGCC CGAAGAGCGG 
GACTTTCGGT TCAAGGACCA GCTGGAAAGC GAGCTGGCCA TCTCTTTCGG CGGCCGCATC 
GCCGAGGAGA TCATCTTCAA CCGGATCAGC ACGGGCGCGG CCAACGACAT CAAGCAGGCC 
ACGGCCCTGG CCCAGAAGAT GGTGCGGGAG TGGGGCATGA GCGAAAATCT GGGCCTGCTC 
TCCTACTCGG CCAACGAGGA GCAGATATTT CTGGGCCGGG AGATATCCCA GCACCGGGAC 
TACTCGGAAG ACACGGCCCG GCGCATCGAC GCGGAGGTGG AGCGGATCAT CAAGTCCGCC 
TATGACACGG CCCGGCGCCT GCTGAAAGCG AATGTGGATA TCCTGCACGC GCTGGCAGAC 
CTGCTGATCG AAAAAGAGAC CGTGCTGGGG CCGGAACTGG ATGAGCTGAT CCGGTCCCTG 
CGGCCGGACA TCGAGCTTTC CGTGCCGTCG GACGACGACA TGCCGGAGGA AAAGCCGGCG 
AAGCCGTCCG AACCGGCGGA GAAGGCCCCG GAGGCTACCG GCACCGAACC AGAAGAACCG 
GAAGAAGAGG ACAAAACATA A 

 

Protein sequence

MLEDSPLNQF SKNMALWLVI ILVMVMLYNM FNQQQNLERT IGYSDFLYMV DNGKVKDVLI 
QGQTLRATSD TGERFSVYMP EDQDLIPTLR AKGIAIEAKP PAEAPWFITA LISWLPMILL 
IGIWIYFMRQ MQSGGGKALS FGKSRARLLS EGANKVTFAD VAGIDEVKEE VGEIIEFLRD 
PQKFTRLGGR IPKGVLLVGA PGTGKTLLAR AIAGEAGVPF FSISGSDFVE MFVGVGASRV 
RDLFLQGKKN APCIIYIDEI DAVGRHRGAG LGGGHDEREQ TLNQLLVEMD GFESNEGVIL 
ISATNRPDVL DPALLRPGRF DRQVVVPLPD IRGRRAILDV YIKKIPAADD VKVNNLAKGT 
PGFSGADLEN LVNEAALFAA KRNKEKVEMV DFEDAKDKVY MGLERKSKVI KEEDKKMTAY 
HEGGHAIVAR LLPDTDTVNK ITIIPRGRAA GVTWFLPEER DFRFKDQLES ELAISFGGRI 
AEEIIFNRIS TGAANDIKQA TALAQKMVRE WGMSENLGLL SYSANEEQIF LGREISQHRD 
YSEDTARRID AEVERIIKSA YDTARRLLKA NVDILHALAD LLIEKETVLG PELDELIRSL 
RPDIELSVPS DDDMPEEKPA KPSEPAEKAP EATGTEPEEP EEEDKT