| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3039 |
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| Symbol | |
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| ID | 5695899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3645244 |
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| End bp | 3647655 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641265656 |
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| Product | phenylalanyl-tRNA synthetase, beta subunit |
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| Protein accession | YP_001530919 |
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| Protein GI | 158523049 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
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| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0321898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTCA GCCTTCACTG GTTGCAGGAA TATGTTCCCG TAACACTGAG CCCCGCGGAC
CTTGCCGAGG CCCTGACCAT GGCCGGCCTG GAAGTGGAGG CCGTGTCCGA CCGGTATGCC
GGCCTGGACA CGGTGGTCAC CGGAAAGGTG ACCCGTGTCT CTTCCCACCC GGACGCGGAC
CGTCTCACCG TCTGCCAGGT GGAGACCGGG GACCGGCCCC TGACCATCGT GTGCGGGGCC
CCCAATGTGA AGGAAGGCAT GGTGGCCGCC GTGGCCCTGC CGGGCACCGA ACTTCCCGGC
GGACTGGCGG TTCGAAAAAG CAAAATACGG GGTGTGGCTT CCGAAGGCAT GCTGTGCAGC
GCCGTGGAGC TCGGTATCGG TGAAGACGGC GCCGGGATTC TCTCTCTGGA CGGCGCCACG
CCTGTGGGCA TTCCGGCGAC CCGGGCCCTG AACCTTTTCG ACACGGTGCT GGAGATTGAT
CTGACCCCCA ACCGGGCCGA CTGTCTCAGC ATGATCGGCG TGGCCCGTGA AGTGGCGGCC
CTGTCCGGCG GCCGAGTCGC AAGACCTGTT TCTTCGGTGC CGGAAGCCGC CGGCGACGTG
GCCGATTACG CGTCGATTGT TATTGAAGAG CCGGACCTCT GTCCCCGGTA CACGGCCCGT
GTGGTCCTGG ATGTCACGGT GGGGCCTTCC CCCTTCTGGC TGCAGGACCG ACTGCGCTCC
GTGGGATTAA AGCCCATTAA CAGCGTGGTG GACATCACCA ACTTCGTGAT GATGGAAACC
GGCCAGCCCC TTCACGCTTT TGACCTGGAC CGCCTTTCCG GAAACCGCAT TGTCGTGCGC
CGGGCCGGGG CCGGGGAGCG TTTTGTCACG CTGGATGACA AGGAACGAGT CCTTTCCGAC
GACATGCTCA TGATCTGTGA CGCCGAAAAG CCGGTGGCCG TGGCCGGTGT CATGGGCGGC
CTTAATTCTG AAATTGTTCC CACCACCCGG CGGGTGCTGA TTGAAAGCGC CTGCTTTGCC
GCTCCTTCCA TTCGCAAAAC CGCCAAGACC CTGGGTCTGG CCAGTGACGC GTCCCACCGC
TTTGAGCGGG GCGTGGACCC GGAGGGAACG GAGTTTGCCG TTGACCGGGC GGCCCGGCTC
ATGGCCGAGG TGGCCGGTGG AAAACCGGCC AGGGGAGTGA TTGACAACCA TCCGCGGCCG
GCCGGCGAAA AACGGATTGC CCTGGGCATC GGTGACACCA ACCGCCGGCT GGGTACGTCT
CTGGGAGCCG AGGATGTGGC CCGGCTGCTG GCATCGGTGG AACTTCTTTC GGAACCGGAG
GACAACGACC GCCTCACCGT TACGGTGCCG TCGTTTCGTG TGGATATCGA CCGGCCCGAA
GACCTCATAG AAGAGGTGGC CCGGCTCTGG GGATACAACA ACATTGCCGT GAGTTTTCCC
GTGATTCCGG TCAGTGGCAG GCTGCCCTCA GGAGCGCTGG CCCGGCGGAT TCGCGTCAAG
GAGGCAATGG TGGGCTTCGG TTTTGCCGAA GTGGTCAACT ACAGTTTTAT CGGCGCCGAC
GCCTGCAGCA GCATGCGTTT TGCGGCCGGC ACCGCCGAAG ACAGCCCCAT TCCGATTCTC
AATCCCCTGT CCCAGGACCA GGCCGTGATG CGGACCTCTC TGGTGCCCGG GCTTTTGAAA
AACACCCGGG ACAACATTTT TCAGCAGGAA AAGACCATTC GCCTGTTTGA AACCGGCAAG
GTGTTTCTGC CCCAACCCGG TCAGGAGCTG CCCGACGAGC CGGAAATGCT GGCCGGTCTC
TGGTCCGGAG CCCGGCAGCC CCGCACATGG CTCACCATGG AAGAGCGGTG CGACTTCTAC
GACATCAAGG GGGTGCTGGA AGCCCTGATC TCCGCCCTTG ACCTGGAAAC CTCTTTTTCC
GCCCTGGCCG CCGACCAGTG CCGGTACACC CTTGCCGGCC GGACCGCCCG GGTGATGATC
GGTGAAACAG CGGTGGGCCT GGCCGGGGAG GTGCGGCCCG ATGTGCTGGA GTCCTTTGGC
GTCAGGCAGC CGGTTTTTGT TTTTGAAATC AATCTTTCCA CGCTGTTTCC CATGATCACG
GACGAAAGGT GTGCCCGGCC CATTTCCCGG TTCCCCTCCG TGTCCCGGGA TATTACCCTG
ATCGTGGCCA GTACCGTGGA GGCCGCCGAC CTGTTGAAAA GCCTTGCCAT GCAGGGCCAG
TCCCTGATAG AACAGATGTA TCTGATGGAT GTTTACGAAG GGGACCCGAT CCCTTCGGGA
AAGAAAAGCC TCTCCATACG GGTTGTCTAC CGGTCTTTTG AAAAAACGCT GAAAGACGCG
TTTGTCAACC GGATTCACAC GGAGACAACC GAGGCGCTGG TCAAGGCGTT TAACGCCGAG
CTGCCCGGTT AA
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| Protein sequence | MKVSLHWLQE YVPVTLSPAD LAEALTMAGL EVEAVSDRYA GLDTVVTGKV TRVSSHPDAD
RLTVCQVETG DRPLTIVCGA PNVKEGMVAA VALPGTELPG GLAVRKSKIR GVASEGMLCS
AVELGIGEDG AGILSLDGAT PVGIPATRAL NLFDTVLEID LTPNRADCLS MIGVAREVAA
LSGGRVARPV SSVPEAAGDV ADYASIVIEE PDLCPRYTAR VVLDVTVGPS PFWLQDRLRS
VGLKPINSVV DITNFVMMET GQPLHAFDLD RLSGNRIVVR RAGAGERFVT LDDKERVLSD
DMLMICDAEK PVAVAGVMGG LNSEIVPTTR RVLIESACFA APSIRKTAKT LGLASDASHR
FERGVDPEGT EFAVDRAARL MAEVAGGKPA RGVIDNHPRP AGEKRIALGI GDTNRRLGTS
LGAEDVARLL ASVELLSEPE DNDRLTVTVP SFRVDIDRPE DLIEEVARLW GYNNIAVSFP
VIPVSGRLPS GALARRIRVK EAMVGFGFAE VVNYSFIGAD ACSSMRFAAG TAEDSPIPIL
NPLSQDQAVM RTSLVPGLLK NTRDNIFQQE KTIRLFETGK VFLPQPGQEL PDEPEMLAGL
WSGARQPRTW LTMEERCDFY DIKGVLEALI SALDLETSFS ALAADQCRYT LAGRTARVMI
GETAVGLAGE VRPDVLESFG VRQPVFVFEI NLSTLFPMIT DERCARPISR FPSVSRDITL
IVASTVEAAD LLKSLAMQGQ SLIEQMYLMD VYEGDPIPSG KKSLSIRVVY RSFEKTLKDA
FVNRIHTETT EALVKAFNAE LPG
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