Gene Dole_3038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_3038 
Symbol 
ID5695898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3644827 
End bp3645204 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content58% 
IMG OID641265655 
ProductMerR family transcriptional regulator 
Protein accessionYP_001530918 
Protein GI158523048 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0025515 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGACAC AGGACGAAAC GAAACCCACC GGGCCGTTGC TTTTTCCCGA ACCCGCCGAC 
AGGGTGGAAA TTCCCGATAA GCTCTATTTC AGAATCGGCG AGGTATGCCG GATCACCGGG
GTGGCGGCCC ATGTGCTGCG GTTCTGGGAG TCCGAGTTCC CCCAGATCCG CCCGGGCAGG
ACCGAGGCGG GCCAGCGGCT TTACAGCCGG TCCGATATCG AGCGGGTTCT CAGCATAAAA
CATCTTCTTT ATAATCAAAA GTTTACCATC AAAGGTGCTC GGCGCTATCT CGGTGCCGGC
GCCAAAGCGG ATCACGCGCC CCGCCTGTTT CAGGAGGTCG TTGACCAGCT CCTGGCCATT
CGAGATATTC TGAGTTAA
 
Protein sequence
MSTQDETKPT GPLLFPEPAD RVEIPDKLYF RIGEVCRITG VAAHVLRFWE SEFPQIRPGR 
TEAGQRLYSR SDIERVLSIK HLLYNQKFTI KGARRYLGAG AKADHAPRLF QEVVDQLLAI
RDILS