Gene Dole_3028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_3028 
Symbol 
ID5695887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp3634178 
End bp3634651 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content66% 
IMG OID641265644 
Productdeoxyuridine 5'-triphosphate nucleotidohydrolase Dut 
Protein accessionYP_001530908 
Protein GI158523038 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0756] dUTPase 
TIGRFAM ID[TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.502701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACCCTT CCACGGACAG TCCGGCACCG GTGGTCAACA TACTCCGGGT CCGGCCAGAG 
GCCGACGCCG ATATCGACCT GCCCCGCTAC ATGACACCAA ATGCCGCGGG AATGGACCTG 
CAGGCGGCCC TGGAAGAAGA CCTCACGGTG GGAAAGGGGC AAATCGCCCT TGTGCCCACC 
GGCTTTGCCG TGGAACTGCC GCCGGGATAT GAGGCCCAGA TTCGTCCCAG AAGCGGCCTT 
GCCGTCCGCC ATGGCATCGG CCTGATCAAC TCGCCCGGCA CCATTGACGC GGACTACCGG 
GGTGAGGTGC AGGTGGCCGT GATCAACTTG GGGCCATCCG ATTTTACCAT TCACCGGAAA 
GACCGCATCG CCCAGATGGT GATTCAACCG GTCTGCCGGG CCCGGCTGGC GCCGGTGGAC 
GAGCTGACCC CCACGGACCG GGGCCCCGGC GGCTTCGGTC ACACCGGCGT ATGA
 
Protein sequence
MNPSTDSPAP VVNILRVRPE ADADIDLPRY MTPNAAGMDL QAALEEDLTV GKGQIALVPT 
GFAVELPPGY EAQIRPRSGL AVRHGIGLIN SPGTIDADYR GEVQVAVINL GPSDFTIHRK 
DRIAQMVIQP VCRARLAPVD ELTPTDRGPG GFGHTGV