Gene Dole_3011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_3011 
Symbol 
ID5695870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3613219 
End bp3614331 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content57% 
IMG OID641265627 
Productinner-membrane translocator 
Protein accessionYP_001530891 
Protein GI158523021 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000152809 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGGGT CACCCGGACA TCTTCATTCT TTTTCATACG GGATACTGCT CATGGATATG 
AAGCGCAATT ATTATGAGGA TGTCGAGATT TTTTCCTCGG GCGCGGTTGT TTTCTGGTTT
GTGGTCCTGG GGTGTTTTCT GGCGGCCTTC CCTTTTCTGT GCAAGCACTA CAATTACAAC
TACTACATCT ATGTGGCCAA CTACATCGCC ATTCAGATTA TCGTGGTGGT GGGCCTCAAC
ATGCTGGTGG GATTTACCGG TCAGATATCC CTGGGCCATG CCGGTTTTTA TGCCGTGGGG
GCCTATGGCA CCATCACCCT GATGACCGAG GCTCACCTGC CTTTTCTGGC GGCCCTGGTG
CTTGCGGCCC TGATCGCGGG GCTGCTGGGG TTTCTGCTGG GCCTGCCCGC CCTTCGGCTG
GAAGGGCCCT ACCTGGCTAT TGCCACCCTG GGCTTCGGCC TCACCATCAC CCAGGTGATC
GGCAAAATCG AGTTGCTGGG GGGGCGCCAG GGGCTTAACG CCCCGGACCT GGTGGTTTTC
GGGCGCGAGC TCAAGACCGA CCAGGATTTT TATTTTCTGG CGGTGCCCAT TGCCGTGCTG
CTGGTGCTGT TTGCCCGGAA TGTGATCAAA ACAAAGGTAG GCCGGGCCTT TATCGCCATT
CGGGACGCCG ACATCGCCGC CGAAACCATG GGCATCAACC TGGTGTTCTA CAAGACCCTG
GCCTTTGCCG TCAGCGCCTT TTACGCCGGC ATTGCCGGCG GGCTGTACGC CTTTGTGCTG
GGCTTTATCG ACCCCGAGCT CTTCAGCCTG TTCCTTTCCA TCATGTTTCT CACCATGGCC
GTGGTGGGGG GCCTGGGGTC GATCATGGGT CCCATTGCCG GCGCCCTGGT GCTGGGCTGG
GTGGACCTGG AGCTTCGCAA TATCTTAAGC ATTCCCTACC TTGGCGACTG GCTGCGGAGC
CTCTCCTCCT CCTATTTTTC TTTGACCGGG GTCTCCAATA TTCAGTTCAT CGTCTTTGGG
GTGATCCTGG TCAGTATCAT GCTGTTTGAG CCGCTTGGTA TTTACGGCAT CTGGATACGA
GCGAAAAAAT ACTGGAAAAC ATGGCCGTTT TAA
 
Protein sequence
MPGSPGHLHS FSYGILLMDM KRNYYEDVEI FSSGAVVFWF VVLGCFLAAF PFLCKHYNYN 
YYIYVANYIA IQIIVVVGLN MLVGFTGQIS LGHAGFYAVG AYGTITLMTE AHLPFLAALV
LAALIAGLLG FLLGLPALRL EGPYLAIATL GFGLTITQVI GKIELLGGRQ GLNAPDLVVF
GRELKTDQDF YFLAVPIAVL LVLFARNVIK TKVGRAFIAI RDADIAAETM GINLVFYKTL
AFAVSAFYAG IAGGLYAFVL GFIDPELFSL FLSIMFLTMA VVGGLGSIMG PIAGALVLGW
VDLELRNILS IPYLGDWLRS LSSSYFSLTG VSNIQFIVFG VILVSIMLFE PLGIYGIWIR
AKKYWKTWPF