Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_3011 |
Symbol | |
ID | 5695870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 3613219 |
End bp | 3614331 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641265627 |
Product | inner-membrane translocator |
Protein accession | YP_001530891 |
Protein GI | 158523021 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000152809 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGGGT CACCCGGACA TCTTCATTCT TTTTCATACG GGATACTGCT CATGGATATG AAGCGCAATT ATTATGAGGA TGTCGAGATT TTTTCCTCGG GCGCGGTTGT TTTCTGGTTT GTGGTCCTGG GGTGTTTTCT GGCGGCCTTC CCTTTTCTGT GCAAGCACTA CAATTACAAC TACTACATCT ATGTGGCCAA CTACATCGCC ATTCAGATTA TCGTGGTGGT GGGCCTCAAC ATGCTGGTGG GATTTACCGG TCAGATATCC CTGGGCCATG CCGGTTTTTA TGCCGTGGGG GCCTATGGCA CCATCACCCT GATGACCGAG GCTCACCTGC CTTTTCTGGC GGCCCTGGTG CTTGCGGCCC TGATCGCGGG GCTGCTGGGG TTTCTGCTGG GCCTGCCCGC CCTTCGGCTG GAAGGGCCCT ACCTGGCTAT TGCCACCCTG GGCTTCGGCC TCACCATCAC CCAGGTGATC GGCAAAATCG AGTTGCTGGG GGGGCGCCAG GGGCTTAACG CCCCGGACCT GGTGGTTTTC GGGCGCGAGC TCAAGACCGA CCAGGATTTT TATTTTCTGG CGGTGCCCAT TGCCGTGCTG CTGGTGCTGT TTGCCCGGAA TGTGATCAAA ACAAAGGTAG GCCGGGCCTT TATCGCCATT CGGGACGCCG ACATCGCCGC CGAAACCATG GGCATCAACC TGGTGTTCTA CAAGACCCTG GCCTTTGCCG TCAGCGCCTT TTACGCCGGC ATTGCCGGCG GGCTGTACGC CTTTGTGCTG GGCTTTATCG ACCCCGAGCT CTTCAGCCTG TTCCTTTCCA TCATGTTTCT CACCATGGCC GTGGTGGGGG GCCTGGGGTC GATCATGGGT CCCATTGCCG GCGCCCTGGT GCTGGGCTGG GTGGACCTGG AGCTTCGCAA TATCTTAAGC ATTCCCTACC TTGGCGACTG GCTGCGGAGC CTCTCCTCCT CCTATTTTTC TTTGACCGGG GTCTCCAATA TTCAGTTCAT CGTCTTTGGG GTGATCCTGG TCAGTATCAT GCTGTTTGAG CCGCTTGGTA TTTACGGCAT CTGGATACGA GCGAAAAAAT ACTGGAAAAC ATGGCCGTTT TAA
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Protein sequence | MPGSPGHLHS FSYGILLMDM KRNYYEDVEI FSSGAVVFWF VVLGCFLAAF PFLCKHYNYN YYIYVANYIA IQIIVVVGLN MLVGFTGQIS LGHAGFYAVG AYGTITLMTE AHLPFLAALV LAALIAGLLG FLLGLPALRL EGPYLAIATL GFGLTITQVI GKIELLGGRQ GLNAPDLVVF GRELKTDQDF YFLAVPIAVL LVLFARNVIK TKVGRAFIAI RDADIAAETM GINLVFYKTL AFAVSAFYAG IAGGLYAFVL GFIDPELFSL FLSIMFLTMA VVGGLGSIMG PIAGALVLGW VDLELRNILS IPYLGDWLRS LSSSYFSLTG VSNIQFIVFG VILVSIMLFE PLGIYGIWIR AKKYWKTWPF
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