Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_3009 |
Symbol | |
ID | 5695868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 3611015 |
End bp | 3612262 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641265625 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001530889 |
Protein GI | 158523019 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000545529 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGAT TCGCAGCGAT AATCATCATC AGCGCCGCAC TGGCCCTGTG CTTCGGCACG GCCGGCATGT GCGAGGTCGG CGTGACCGAT ACCGAGATTC ACATCGGCCA GTGGGGTCCC CAGACCGGCC CGGCCGCGCC CTGGGGCGCC GTGGCCCGGG GTACCGACGC CTACTTTAAA ATGATCAATG CCGAAGGCGG CATTCACGGC CGCAAGCTGG TCCATCACTA TTTTGACGAT GCCTACAACC CGGCCAAGAC CGTGGCCGGC GTCAAGCAGC TTCAGGAACA GGAGGGCATG TTCGCCTGGG TCAGCGGCGT GGGCACGGCC ACGGGCCTGG CGGTCAAGGA CTACCTGATG GAAAACAAGA TTCCCTGGAT CGGTCCGTCT GCCGGTTCCC GCCACTGGGT GGAGCCGCCC CAGAAATACC TGTTCAACGT TTATCCCTTC TACATGGGCG ATGCCCAGCT CCTGTGCCAG TATGCCGTTG AAACCATGGG CAAGAAGAAA ATTGCCATTG CCTTTCAGAA TGACGACTAC GGCAAGCAGG GCGTGGAAGG CGCTGAGTAC CAGCTTAAAA AGGCGGGCCT GGAGCTGGCC GTCAAGGTGC CGGTCAACGT GGCTGATACC GACATGATTC CCCATGTCAT GGAGCTGAAA AAAGCCGGGG CCGACGCGGT GCTGCTGTTT GTCACCCCTG GTCATGTGGC CCGCATCATC GGCACGGGCA AGGCCATGCA GTTTGAGCCC ACCTGGATGT CCACCTCCAC CTGCGGTGAC TTTCCCCTGA TGATGGCCAT CACCAAGGGC CTTTGTAAGG GCCTGATCAC GGCATCTTTC GGTCTTGCCG AACCCACGGG CCATGTGGGG GAAGTCCAGC TTCTTGATAA TCCGGTTCAG AAAATGGTCG CCAAGTACAA GACCGATGCC TTTGACAAGT TCGCGGCCAA GGATGAACGG TACGGCTACA CCTTTCTCGC GGGTATCGGC TTTGCCGAGC CCCTGGTGGA GGCCATCCGC CGCTGTGGAA AGGACCTGAC CCGGGAGAAA CTGGTCAAGG AACTGGAAAA CATGAAGAAC TTCAAGGGCG TCCTGGGCCG TATCAACTAC AAGCCCTTTG ACCCCAAGGA CCCCCTCTGT CGCCTGGGCC AGGGAGAGGT CTTTCTCCAG GAGTGCACGG AAAACGGCGG ATCCAAGATC CTGACCGACT GGGTAACAAC CACCTACCTG CCGTCAAAGG CGGAATAA
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Protein sequence | MKRFAAIIII SAALALCFGT AGMCEVGVTD TEIHIGQWGP QTGPAAPWGA VARGTDAYFK MINAEGGIHG RKLVHHYFDD AYNPAKTVAG VKQLQEQEGM FAWVSGVGTA TGLAVKDYLM ENKIPWIGPS AGSRHWVEPP QKYLFNVYPF YMGDAQLLCQ YAVETMGKKK IAIAFQNDDY GKQGVEGAEY QLKKAGLELA VKVPVNVADT DMIPHVMELK KAGADAVLLF VTPGHVARII GTGKAMQFEP TWMSTSTCGD FPLMMAITKG LCKGLITASF GLAEPTGHVG EVQLLDNPVQ KMVAKYKTDA FDKFAAKDER YGYTFLAGIG FAEPLVEAIR RCGKDLTREK LVKELENMKN FKGVLGRINY KPFDPKDPLC RLGQGEVFLQ ECTENGGSKI LTDWVTTTYL PSKAE
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