| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2972 |
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| Symbol | |
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| ID | 5695831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 3564153 |
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| End bp | 3565496 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641265588 |
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| Product | peptidase M48 Ste24p |
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| Protein accession | YP_001530852 |
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| Protein GI | 158522982 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.297503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACCC ACATCCCTGC GCCCCGACAG ACCCTCAGCC GACGGGAGTT CCTGCAGATG
TCGGCCCTGG CTTCGGCCGG CCTGATTCTC GGGTGCGCCA TCAACCCGGT AACCGGTGAA
AAACAGCTCA TGCTGGTGTC CGAGGAGTGG GAGGTCCAGG TGGACCGGCA GAACGCGCCC
CACCAGTTTT CCGCCGACTA CGGAACCATT CAGGACCAGG CGGTAAACCG CTATGTTCAG
CAGGTCGGCG CAAACCTGGT GAAAAACACG CACCGGCCCC AGATGCCCTA CTCCTTCCGG
TGCGTCAATG CCACCTACAT CAATGCCTAC GCCTTTCCCG GCGGCAGCAT CGCCGCCACC
CGGGGCATTC TGCTCTCCCT GGAAAGCGAG GCCGAACTGG CCGCGCTGAT GGGCCATGAG
CTGGGCCATG TCAATGCCCG GCACACGGCT CAGCAGATGT CCAAGGGCAT GGTGACCCAA
ACCCTGGTGG GCGGGGTCAG CGCGTACATC GGCACCCATG GCACGGCCTT CGGCACTGTG
GCCGAACAGC TCGGCATGCT GGGCGCCGGC GCGCTTCTGG CCGGATACAG CCGCGACAAT
GAACGGGAGG CCGACCACCT GGGTCTGGCC TACATGACCC AAAGCGGATA CGGCACCGAC
GGCATGGTCG GTCTCATGGC CATGCTCAAT TCCCTTCACA AGGGCGGCAC CGACGCGGTC
TCCCTGCTGT TTTCCACCCA CCCCATGAGC CAGGAGCGAT ACGATACAGC CGTGGCCGAG
GCCGGCGCCG AATTTGCCGC CGCCAAAAGC CTGCCCGTTC ACCGGGAGCG ATACATGGAC
AGCACCGCGT CTTTACGCAA AATAAAACCG GCCATTGAGC TGTTTCAAAA AGGAGAAGCC
GCCATGGCCA GGGAAAATTT TGATGCCGCT GAAACCGCGC TGCAGCAGGG CCTGAAGCTT
GCCCCGGCCG ACTATGCCGG CCTTGTGATC ATGGCCAAAT GCCGGCTCTC CCAGGGAAAA
TACGCAGAAG CCCTGCGCTT TTCGGAAACC GCGGGACAGG TCTATCCCCA GGAGGCCCAG
GCCAGCCACC TGAGCGGTTT TGCCAGAATC AAGCTGAAAC AGTTTGAGGG GGCGGTTGCC
AATTTTACCG CCTATGAGAA AAAGCTGCCC GGCAACCCCA ACACCGCTTT TTACAGGGGC
TATGCCTACG AAGGGATGAA CAACAGGCAG AAGGCCGCCG CCGATTACGT GGCCTATCTC
AAACAGGTCA ACCAGGGGGA CCAGGCCCGG TACGCCTACA ACCGCCTGGT GGAGTGGGGG
GTTGTCAAAC CGGCCGGCCA GTGA
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| Protein sequence | MKTHIPAPRQ TLSRREFLQM SALASAGLIL GCAINPVTGE KQLMLVSEEW EVQVDRQNAP
HQFSADYGTI QDQAVNRYVQ QVGANLVKNT HRPQMPYSFR CVNATYINAY AFPGGSIAAT
RGILLSLESE AELAALMGHE LGHVNARHTA QQMSKGMVTQ TLVGGVSAYI GTHGTAFGTV
AEQLGMLGAG ALLAGYSRDN EREADHLGLA YMTQSGYGTD GMVGLMAMLN SLHKGGTDAV
SLLFSTHPMS QERYDTAVAE AGAEFAAAKS LPVHRERYMD STASLRKIKP AIELFQKGEA
AMARENFDAA ETALQQGLKL APADYAGLVI MAKCRLSQGK YAEALRFSET AGQVYPQEAQ
ASHLSGFARI KLKQFEGAVA NFTAYEKKLP GNPNTAFYRG YAYEGMNNRQ KAAADYVAYL
KQVNQGDQAR YAYNRLVEWG VVKPAGQ
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