Gene Dole_2928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2928 
Symbol 
ID5695787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3516990 
End bp3517649 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content40% 
IMG OID641265544 
Producthypothetical protein 
Protein accessionYP_001530808 
Protein GI158522938 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATGA TGCCGGAAAA TCATACATTA CAAAAAAAGG ACATAAAGCA TGCCCGGATA 
AAGGTCGCTG AAGACGGGCA TGTAAGGGTG CTGGTTCCCC ATTCCTTTAC GGATGATGAT
ATTTCGGCGC TCCTAACTAA AAAATCTAAA TGGATTGCCA AACAACGAGC CTTTTTCAAC
AAGAAGTCTC GCATTGAGCT GGCGCGGAAC CAATTGCTTT TGTTCGGTAA CCGATATTCT
TATTTTTACG ATGATACATA TAGCCGAAAA ATTTTGATTG ATCACAGCTT TAAAACCATC
CGGGCCAAAA AGGATCTTCT TGATCCTGCA ATTCAAAAGA AGTGGTACAA ACACGAAGCC
AGAAAGTACT TAGTAAGCAG GACTGAGGAC TTGGCAGAAA GGCTACACTT TAAATACAAA
GCAATTTACA TCAGGGATCA AAAAACCAAG CTGGGAAACT GTTCCTATGA TCGCAACATT
TCCCTGAATT GGCGGCTGAT TAAGGCCCCA ACCCTGATTT CTGACTATAT TATTATTCAT
GAGCTTGTTC ACACTAAAAT AATGAACCAT TCAGGTAAAT TCTGGACGCT ACTGAAGTCG
TTATATCCCT ATTACAAGGA TGCGATGAAT TGGCTCGATA AATATGGAAA TTGCTTATGA
 
Protein sequence
MMMMPENHTL QKKDIKHARI KVAEDGHVRV LVPHSFTDDD ISALLTKKSK WIAKQRAFFN 
KKSRIELARN QLLLFGNRYS YFYDDTYSRK ILIDHSFKTI RAKKDLLDPA IQKKWYKHEA
RKYLVSRTED LAERLHFKYK AIYIRDQKTK LGNCSYDRNI SLNWRLIKAP TLISDYIIIH
ELVHTKIMNH SGKFWTLLKS LYPYYKDAMN WLDKYGNCL