Gene Dole_2902 details

Gene Information

• Locus tag: Dole_2902
• ID: 5695760
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 3488449
• End bp: 3488922
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 641265517
• Product: CMP/dCMP deaminase zinc-binding
• Protein accession: YP_001530782
• Protein GI: 158522912
• COG category: [F] Nucleotide transport and metabolism; [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0590] Cytosine/adenosine deaminases

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000164713
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGATGC ACGACGCATT CATGCGGCGG GCCATTGAGC TGGCCCGGGC CGGTATGAAA 
GCCGGCGACG GCGGGCCCTT CGGCGCGGTG GTGGTGCGCG ACGGACAAAT CGTTGGAGAA 
GGGGCCAACC GGGTGCTGGC CCATAACGAC CCCACGGCCC ACGGCGAGAT CGTGGCCATT 
CGGGACGCGG CAAAACGCCT GGGCACCTAT GACCTTGACG GATGCGTGCT CTACACCACG 
GGCCAGCCCT GCCCCATGTG CCTGGGCGCC ATCTACTGGG CCCACATTCA AACCGTCTAT 
TTCGGATTTT CCATTGTTGA TGCCGGGACT GTTGGCTTTA ATGATGCCGT GATTTTTAAT 
GAATTTGCCC TTCCACCTGA AAAAAGACGG GTCAACTGCC GCCCCCTGCT GACCGATGAA 
GCCATGATTC TGCTAAAAGA GTTTGAGTTC CTGCCGAATC GGCCCCAATA TTAA 

 

Protein sequence

MEMHDAFMRR AIELARAGMK AGDGGPFGAV VVRDGQIVGE GANRVLAHND PTAHGEIVAI 
RDAAKRLGTY DLDGCVLYTT GQPCPMCLGA IYWAHIQTVY FGFSIVDAGT VGFNDAVIFN 
EFALPPEKRR VNCRPLLTDE AMILLKEFEF LPNRPQY