| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2847 |
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| Symbol | |
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| ID | 5695705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3429935 |
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| End bp | 3431389 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641265462 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001530727 |
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| Protein GI | 158522857 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGCCC TCAAAGCCGG AGGGATTGAT CTCTTCCCTT CCACTTTCAA TGTCACCCAC
ACGGTGGCCG ACATGCTCGG GTTGATTGAG GCCGGACGGC CGCCGTCACC GGAGAGTGAT
AACCTGCCGG TACTGGCCGG CCGCATGATG GCCATCAACC GCTTCGGCAA GGCTGCCTTT
GTCCGTTTCA GGGACCGTAC CGGCCTGATG CAGGCTTACA TACAGAAAGA CAAGGTGGGC
AGTGACGCCT ACGCCCTTTT CAAGCAGATG GACGTGGGCG ACGTTATCGG TCTTTCCGGG
GGCCTGTTTC AGACAAAAAC CGGGGAATGG ACCGTTCAGG CCGAAACGAT CCGGCTGCTC
TGCAAGGCCA CCCGGCCCCT GCCGGAAAAA TTTCACGGTC TCAAGGATCC GGAAAAACGG
TATCGGAAGC GGTACCTGGA CCTGATCATG AACAGCGCCA CCCGGGACGT CTTTATTCGT
CGGAGCCGGG CGATCCAGGC CATTCGGACC TTTCTGCTGG AGCGGGATTT TCTGGAGGTG
GAAACGCCCA TGATGCAGCC CATTCCCGGC GGGGCCGAGG CCAGACCCTT TGTGACCCAT
CACAATGCCC TGGACATGGA CCTGTTTCTT CGCATCGCGC CGGAACTCTA TCTCAAGCGG
CTGGTGGTGG GCGGTTTTGA GAGAGTGTTT GAAATCAACA GGAATTTTCG GAACGAAGGG
ATTTCCACCC GTCACAATCC GGAGTTCACC ATGCTGGAGT TCTACCAGGC TTATGCCGAC
TACCAGGGCC TGATGGCCAT GACCGAAGAT CTGTTCTGCC ATGTGGCTGA AGCGGTGACC
GGTTCCCGGC AGGTCGTTTA CCAGGCGCAT ACCATTGATT TTTCCGGACC CTGGCCCAGA
GTGCCCCTGC TGGAGGCCCT GCAACGGATC GGCGGTGTGG ACGCGGGGAT ACTGAACGAC
CGGGAGGCCC TGCTGGCCCA TGCCGCGGCC AGAGGGGTGC AGATCGCCCG GACGGACACC
AGCACCGGCA AGGTGATCAC CAAGTTGTTC GACGCGCTGG TGGAGCCCCA CCTGATTCAG
CCCACCTTTA TCACCGGCTA TCCGGTGGAG GTCTCACCGC TTTCAAAAGC CAGCGCGCAG
GCGCCGGGGT TTGTAGACCG GTTTGAACTG TTTATCGCGG GCAATGAAAT CGCCAACGGA
TTTTCAGAGC TCAATGATCC CGAAGAGCAG CGCCAGCGGT TCGCGGCTCA GGTGGCGGCC
CGGAAAGCCG GGGATGACGA GGCCCATTTC ATGGATGAGG ACTATATTGA GGCCCTTGAA
TACGGCATGC CGCCCACGGC CGGCGAAGGC ATCGGCATCG ACCGGCTGGT CATGCTGCTG
ACCGATGCGC CTTCCATTCG GGAGGTCATT CTTTTTCCCC ATATGCGGCG GGAAGAAGCG
CCGGGCAATG CCTGA
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| Protein sequence | MSALKAGGID LFPSTFNVTH TVADMLGLIE AGRPPSPESD NLPVLAGRMM AINRFGKAAF
VRFRDRTGLM QAYIQKDKVG SDAYALFKQM DVGDVIGLSG GLFQTKTGEW TVQAETIRLL
CKATRPLPEK FHGLKDPEKR YRKRYLDLIM NSATRDVFIR RSRAIQAIRT FLLERDFLEV
ETPMMQPIPG GAEARPFVTH HNALDMDLFL RIAPELYLKR LVVGGFERVF EINRNFRNEG
ISTRHNPEFT MLEFYQAYAD YQGLMAMTED LFCHVAEAVT GSRQVVYQAH TIDFSGPWPR
VPLLEALQRI GGVDAGILND REALLAHAAA RGVQIARTDT STGKVITKLF DALVEPHLIQ
PTFITGYPVE VSPLSKASAQ APGFVDRFEL FIAGNEIANG FSELNDPEEQ RQRFAAQVAA
RKAGDDEAHF MDEDYIEALE YGMPPTAGEG IGIDRLVMLL TDAPSIREVI LFPHMRREEA
PGNA
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