| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2836 |
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| Symbol | |
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| ID | 5695694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3417413 |
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| End bp | 3419170 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641265451 |
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| Product | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA |
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| Protein accession | YP_001530716 |
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| Protein GI | 158522846 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.333651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATTT TTCGATTAAA ACCACGACAC CGCAGCCTGC TGGGATACAT CAAGGGAAAC
CGTTTCCGGC TTTACCTGGC CGTGGCCTGC ATGCTGCTGA CATCGGCTAC CACCGCGGCC
CTTGCCTATC TCATCAAGCC GGCCATTGAT CAGATTTTTA TCACCAAGGA CGCCCAAATG
CTTCGGCTGA TTCCGCTGGC GGTGGTGATT GTCTCCCTGC TGCGGGGCAC GGGCATGTAC
GGCCAGGAGT TTTTCATGGG CCGGGTGGCC GAGGGCATCA TCAAAAATTT TCGGGACAAT
CTTTATGCCC GGATATGTCA GCTCCCTCTG GCCTTTTTTC ACAAGGAGCG CACCGGGGTC
CTGATGTCCC GCATCACCAA TGATGTGAAT CTCATCAAGA TCGTTGTCTC CAATGCCGTC
ACCTCCATGG TACGCGACTT CTGCACGGTT TTTTTCCTGC TGGGGCTGAT CTTCTACCAG
ATATGGGAGC TGGCCCTGGT GGCCTTCATC GTCCTGCCGG TGGCCTTCTA CCCGGTGGTG
GCCATCGGCC GGAAGGTGCG GCGGGTCTCC ACCCGGAGCC AGGAGACCAT CGCCGACATG
AACGCTTTTC TGCACGAGAC CTTTTCCGGC AACAAGATCG TCAAGGCCTT TGGCATGGAG
GCCTACGAAG AGGCCCGGTT TTATGAAAAG TCCCGGTCGC TTTTTGTGAT TGAGATGAAA
AGCATCATGG TGCGGGCACT GTCGTCTCCG CTCATGGAGT TCGTGGCCGG GGCGGGCATC
GCCTTTGTCA TCTGGCTGGG CGGCTCCCGG GTCATCAGCG GGGTCTATAC CACCGGTACC
TTTCTGTCGT TTCTGGCGGC GGTGATGCTG ATGTACGACC CGGTGAAAAA GATTTCCGGT
TTAAATGCCC TGCTTCAGCA GGGGCTGGCC GCCGTGGACC GGGTCTACGA TATTTTAGAA
ACCCGGTCCG ATATCGTTGA AGCGCCGGAC CCGGTGACGA TACAACGGGC CCCCCACACA
GTGGCGTTTG AGAAGGTCTC GTTTGTCTAC GACACCGGCG GGCCGGTACT TACCGACATC
AACCTGACGG TGGCGCCGGG CGAAGTGGTG GCCCTGGTGG GCGCCAGCGG CGGCGGCAAA
ACCACCCTTG TCAACCTGAT TCCCCGGTTT TATGATGTGG CCTCCGGTCG CATTCTTATC
GATGGCACGG ACATCCGCAA GGCATCCATC GCCTCGCTGC GGGAGCAGAT CGCCATTGTC
ACCCAGGAGC CCATCCTGTT CAACGACACC GTGCGCAACA ACATCGCTTA CGGTAATCAG
GATGCATCGG AGGCGGATAT CCTTCAGGCG GCAAAAGACG CCTATGCGTA TGACTTTGTC
GTGGGGTTTC CCAAGGGGTT TGATACCATG ATCGGCGAGC TGGGAGCGCG TCTTTCAGGT
GGGCAAAAGC AACGGCTCTG CATTGCCCGG GCCCTGCTCA AGGACGCGCC GGTCCTGATT
TTGGATGAGG CCACTTCGGC CCTGGACAGT GAATCCGAGG CAGTGGTGCA GAAGGCTCTG
GCCAACCTGA TGAAGGGCCG CACCACCTTT GTGATTGCTC ACCGGCTCTC CACGGTCCAC
CATGCGGACC GGATCGTGGT GCTGTCGGAC GGCCGGATCA CCGAGCAGGG AAAGCACGAG
GAGTTGCTGG CCCGAAAAGG GGATTATGCC CGGCTCTGCC AGATGCAACT CAGCAACGGC
GGGCTTCAGG AAGAGTAG
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| Protein sequence | MAIFRLKPRH RSLLGYIKGN RFRLYLAVAC MLLTSATTAA LAYLIKPAID QIFITKDAQM
LRLIPLAVVI VSLLRGTGMY GQEFFMGRVA EGIIKNFRDN LYARICQLPL AFFHKERTGV
LMSRITNDVN LIKIVVSNAV TSMVRDFCTV FFLLGLIFYQ IWELALVAFI VLPVAFYPVV
AIGRKVRRVS TRSQETIADM NAFLHETFSG NKIVKAFGME AYEEARFYEK SRSLFVIEMK
SIMVRALSSP LMEFVAGAGI AFVIWLGGSR VISGVYTTGT FLSFLAAVML MYDPVKKISG
LNALLQQGLA AVDRVYDILE TRSDIVEAPD PVTIQRAPHT VAFEKVSFVY DTGGPVLTDI
NLTVAPGEVV ALVGASGGGK TTLVNLIPRF YDVASGRILI DGTDIRKASI ASLREQIAIV
TQEPILFNDT VRNNIAYGNQ DASEADILQA AKDAYAYDFV VGFPKGFDTM IGELGARLSG
GQKQRLCIAR ALLKDAPVLI LDEATSALDS ESEAVVQKAL ANLMKGRTTF VIAHRLSTVH
HADRIVVLSD GRITEQGKHE ELLARKGDYA RLCQMQLSNG GLQEE
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