Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2818 |
Symbol | |
ID | 5695676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 3400263 |
End bp | 3400916 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641265433 |
Product | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 |
Protein accession | YP_001530698 |
Protein GI | 158522828 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000104 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTAA AGGAACTGCA AGTCAAAACA CGTCAGATGG CGGGTGGGCC CACCCCAAAG GCGCTGCGGC GCCAGGGGTT TGTTCCCGCA ATAGTGTATG GTCATAAAAA CGACCCGCTT CCCCTTGCCG TGGACGATCA CACTTTTCGC CTTCTGCTCA AGGACGCCGG CCAACAGGCC CTTCTCTCCC TCGTCATCGA CGACGGGGCC GCGTCAAAAA CCGTCATGCT CAAGGAGCTC CAGCAACACC CGGTCTCCCT GAAGCTGATT CACGCCGATT TTCACGAAGT GGATCTGACC AAGAAAATCA CCACCTATGT CCCTGTTGCC ACAACGGGTG TGTGCAAGGG CGAAAAAGAG GGTGGTGTGC TTCAGCTGAT CCGTAGAGAA CTGGAAGTGC GCTGCCTGCC GGGACTTATT CCGGAATCCA TCGCCATCGA TATCAGCGCT CTCGACATCG GTGATTCGGT CCACGTGGCT GATATCGAGG CCCCGGAGGG GGTTGAGCTG GTGCATGAGG TCAACTTCAC GGTGATCGCC GTAGCCGCGC CTACAAAAGA AACGGTTGAA GACGAAGAAG CAGAAGAGGC CGCGGCAGAA GGCGCCGAAG AGACCGGGGA GACCGGGGAG ACAGAAGAAG GCGGCGACGA ATAA
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Protein sequence | MELKELQVKT RQMAGGPTPK ALRRQGFVPA IVYGHKNDPL PLAVDDHTFR LLLKDAGQQA LLSLVIDDGA ASKTVMLKEL QQHPVSLKLI HADFHEVDLT KKITTYVPVA TTGVCKGEKE GGVLQLIRRE LEVRCLPGLI PESIAIDISA LDIGDSVHVA DIEAPEGVEL VHEVNFTVIA VAAPTKETVE DEEAEEAAAE GAEETGETGE TEEGGDE
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