Gene Dole_2818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2818 
Symbol 
ID5695676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3400263 
End bp3400916 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content57% 
IMG OID641265433 
Productribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 
Protein accessionYP_001530698 
Protein GI158522828 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1825] Ribosomal protein L25 (general stress protein Ctc) 
TIGRFAM ID[TIGR00731] ribosomal protein L25, Ctc-form 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000104 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAA AGGAACTGCA AGTCAAAACA CGTCAGATGG CGGGTGGGCC CACCCCAAAG 
GCGCTGCGGC GCCAGGGGTT TGTTCCCGCA ATAGTGTATG GTCATAAAAA CGACCCGCTT
CCCCTTGCCG TGGACGATCA CACTTTTCGC CTTCTGCTCA AGGACGCCGG CCAACAGGCC
CTTCTCTCCC TCGTCATCGA CGACGGGGCC GCGTCAAAAA CCGTCATGCT CAAGGAGCTC
CAGCAACACC CGGTCTCCCT GAAGCTGATT CACGCCGATT TTCACGAAGT GGATCTGACC
AAGAAAATCA CCACCTATGT CCCTGTTGCC ACAACGGGTG TGTGCAAGGG CGAAAAAGAG
GGTGGTGTGC TTCAGCTGAT CCGTAGAGAA CTGGAAGTGC GCTGCCTGCC GGGACTTATT
CCGGAATCCA TCGCCATCGA TATCAGCGCT CTCGACATCG GTGATTCGGT CCACGTGGCT
GATATCGAGG CCCCGGAGGG GGTTGAGCTG GTGCATGAGG TCAACTTCAC GGTGATCGCC
GTAGCCGCGC CTACAAAAGA AACGGTTGAA GACGAAGAAG CAGAAGAGGC CGCGGCAGAA
GGCGCCGAAG AGACCGGGGA GACCGGGGAG ACAGAAGAAG GCGGCGACGA ATAA
 
Protein sequence
MELKELQVKT RQMAGGPTPK ALRRQGFVPA IVYGHKNDPL PLAVDDHTFR LLLKDAGQQA 
LLSLVIDDGA ASKTVMLKEL QQHPVSLKLI HADFHEVDLT KKITTYVPVA TTGVCKGEKE
GGVLQLIRRE LEVRCLPGLI PESIAIDISA LDIGDSVHVA DIEAPEGVEL VHEVNFTVIA
VAAPTKETVE DEEAEEAAAE GAEETGETGE TEEGGDE