| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2815 |
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| Symbol | |
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| ID | 5695672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 3396688 |
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| End bp | 3398145 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641265429 |
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| Product | protease Do |
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| Protein accession | YP_001530695 |
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| Protein GI | 158522825 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.351815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACATT ACGCCACTCT CCCCACGGCA ATCAGCAGGC GGTGCGTGGC GGGCGCCGGA
ATGGCCCTTG CCCTGCTTAC CCTGCTTTTT ACCATGAACT CGGCGGCCCT GGCCGCGATT
CAAAAACAGC CGGCCCTGAT TCCCGAATCA TTCAGCGAAC TGGCCGACGC TATCGGTCCG
GCCGTGGTCA ACATCCGCAC CGAAACAACA ACGGCCCAGA GCGACCGCCT GTCCCGCCAT
TTTTTTAACT CCCCCTTTGG AGAAAACGAC CCGTTTAACG AGTTCTTCGA GCGGTTTTTC
AATGCCCCCC ACGGCCGGCA GTTCAAGCAA CGCAGCCTGG GCTCGGGGTT TGTCATCGAT
TCACGGGGGC TGATCGTCAC CAACAACCAC GTGGTGGAAA ACGCGGACAA GATTATTGTC
AAGCTCAAAG ACGGTGATGA GTTTGACGCC ACGGTGGTGG GAACCGACGC CAACACCGAT
CTGGCCCTGC TGGAAATCGA GGCAAAGCGG CCCCTTCCCA GCCTGGAGCT GGGCGATTCA
GACGACCTGA AGGTGGGGGA ATGGGTGGTG GCCATCGGCA GCCCCTTCGG CCTGGAACAG
ACCGTCACCG CGGGCATCGT CAGTGCCAAG GGCCGGGTGA TCGGGGCCGG TCCCTATGAC
GACTTCATTC AGACCGACGC CTCCATCAAC CCCGGCAACA GCGGCGGCCC CCTGGTCAAC
CTGGCCGGCG AGGTGGTGGG CATCAACACC GCCATCATTG CCAGCGGCCA GGGCATCGGG
TTTGCCATTC CCGCCAACCT TGCCAACAAC ATTCTTGAGC AGCTGGAGAC CAAAGGCCAC
GTGATTCGCG GCTGGCTGGG CGTGGGCATT CAGCCGGTGA GCAAAGAGAT GGCCGAGTAT
TACAACCTGG AAAGCGGCAA AGGGGCACTG GTCACCGAGG TCTTTCCCGG GGATCCGGCG
GACAAGGCCG GCATCAAGAC CCAGGACATC ATTCTTGAGG TCAACGGTAA AGAAATTAAA
GACAGCCGGG ATCTTTCCGC CATGATCGCC AGCCTGCCCG TGGGAGAAAC CATCAAAGTA
ATGCTGCTGC GGGACGGAAA GAAAAAAACC GTAACCGTCA AGATCAAGGA ACGGGACGAC
ACCCGCGTGG CGGGCAAATC GGAAACCGGC ACCCAGAGCG CCATGGACCT GGAAGTGGCC
GACATCACCG AAGAGGTGGC CAGAAAACTG AACCTGAACA GCACCGAGGG CGTGTACGTG
TCTGAAGTGG CCCCCGGTGG AAAGGGCGAT CAGGCCGGCA TTCAGCCGGG AGATGTGATC
AGAGAGATCA ACCGGCAGCG CATTCAGAAC ACGGCCGACT TTGAGGCCAT CCTGAAAGGT
ATCAAGGAGG GAGACCCCCT GCTGATCCTG ATTCGAAAAT CCAACGGCAT GTTCATGGTG
ATAAAAACCA CCCGGTAG
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| Protein sequence | MKHYATLPTA ISRRCVAGAG MALALLTLLF TMNSAALAAI QKQPALIPES FSELADAIGP
AVVNIRTETT TAQSDRLSRH FFNSPFGEND PFNEFFERFF NAPHGRQFKQ RSLGSGFVID
SRGLIVTNNH VVENADKIIV KLKDGDEFDA TVVGTDANTD LALLEIEAKR PLPSLELGDS
DDLKVGEWVV AIGSPFGLEQ TVTAGIVSAK GRVIGAGPYD DFIQTDASIN PGNSGGPLVN
LAGEVVGINT AIIASGQGIG FAIPANLANN ILEQLETKGH VIRGWLGVGI QPVSKEMAEY
YNLESGKGAL VTEVFPGDPA DKAGIKTQDI ILEVNGKEIK DSRDLSAMIA SLPVGETIKV
MLLRDGKKKT VTVKIKERDD TRVAGKSETG TQSAMDLEVA DITEEVARKL NLNSTEGVYV
SEVAPGGKGD QAGIQPGDVI REINRQRIQN TADFEAILKG IKEGDPLLIL IRKSNGMFMV
IKTTR
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