Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2813 |
Symbol | |
ID | 5695670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 3394644 |
End bp | 3396242 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641265427 |
Product | D-3-phosphoglycerate dehydrogenase |
Protein accession | YP_001530693 |
Protein GI | 158522823 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATGA AAGTGCTTGT ATCCGACACC ATTGACGCGT CCGGCGTATC CCGCCTGGAG AACGAATCCG GCTTTGCCGT TGACGTTAAA ACCGGGCTTC CCCCGGAGGA ACTGAAATCC ATTATTGGAC AGTACGACGC CCTGATCATT CGCAGCGCCA CCAAGGTGAC CGCCGATATT CTCGAAGCGG GTGCCCCGAA GCTCAAGGCC GTGGCCCGGG CCGGCATCGG CCTGGACAAC GTGGATATTC CCGCGGCTAC CAAGCACGGC GTGGCCGTGA TGAACACGCC GGAAGGCAAC GTGGTGACAA CGGCGGAGCA CACCATTGCC ATGATGATGG CCCTGACCCG CAACATTCCC CAGGGGACCC TCTCCCTGCG GTCCGGCCAG TGGGAAAAGA AAAAACTCCA GGGCCGGGAG GTGTTCAACA AGACCCTGGG CGTGATCGGT TTCGGCAAAA TCGGTTCCAT CGTGGCCGAC CGGGCCCGCC AGCTCAAGAT GAACGTTATT GTCTTTGACC CCAACATCGC CCGGACCACC ATTGAAAATG AAGGGTTCGA GTATGTCTCT TTAGACGACC TTTTTGCCCG GGCCGACTAC ATCACCGTCC ATGTACCCAA GCTCAAGCAG ACCGTGGGGC TTTTAAACAA GGCCGCCTTT GAAAAGATGA AAACCGGCGT GATGGTTCTC AACTGCGCCC GGGGCGGCAT TGTGGATGAG GCCGACCTGT ACGACGCCCT GATGTCGGGC AGGGTGGCGG CCGCGGCCCT GGACGTGTTT GTGACAGAAC CGCCCGGTGA GCACCCCCTG CTCAAGCTGG ACAACGTGAT CGCCACGCCC CATCTGGGCG CCTCTACCAA GGAGGCCCAG GTCAACGTGG CCGAGGCCGC GGCCCACCAG ATCATTGAGT TCCTCAAAAA CAACACGGTG ATCAACGCCG TCAACCTGCC GGCCGTGTCC GGCGACCTGC TGGAAAAACT GTCGCCCTTC ACTACCCTGG CCGACCGCAT GGGCCGCCTG CTGGCCCAAT TTTCAGGGGC CAACATCACC GAAATCAAGA TTGAATACAA CGGTGACTTT CAGGGCCTGG ACCTGGCGCC GGTCACCACC GCCGCGGTCA AGGGCCTGCT CACGCCCCTG GTGGCCTACC AGGTCAACTC GGTAAACGCC GCCTCCCTGG CCGGAGAGAT GGGCATTGCC ATCACCACCC GCAGCGAAAC CCTTCCCATC GACTACACCA GCCTGATCAC CATCAGCGTG ACCTCCGGCG CCGGCACCCA CACCGTGGCC GGCACCATCT TTGGCAAAAA GGAGGCGCGG GTGGTCCGGA TCAACGACTT CCGGCTGGAG ATGATTCCTA CAAAAGGCCA TTTTGCCATC ATTCACAACC TGGACAAGCC CGGCGCCATC GGCAGCATCG GCACCACCCT GGGCACCTTC GGCGTCAACA TCGAGCGCAT GCAGGTGGGC CAGCAGGGCG ACACCCTGCG CAACATCATC TTCCTGAGAA CCGGATCGCG CATTCCCGAC GATGCCCTGG CGGCCGTAAA AGAGCTGCCC CTGGTCAAGG ATGTGACGGT TTTTGAGCTT GACGAATAG
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Protein sequence | MTMKVLVSDT IDASGVSRLE NESGFAVDVK TGLPPEELKS IIGQYDALII RSATKVTADI LEAGAPKLKA VARAGIGLDN VDIPAATKHG VAVMNTPEGN VVTTAEHTIA MMMALTRNIP QGTLSLRSGQ WEKKKLQGRE VFNKTLGVIG FGKIGSIVAD RARQLKMNVI VFDPNIARTT IENEGFEYVS LDDLFARADY ITVHVPKLKQ TVGLLNKAAF EKMKTGVMVL NCARGGIVDE ADLYDALMSG RVAAAALDVF VTEPPGEHPL LKLDNVIATP HLGASTKEAQ VNVAEAAAHQ IIEFLKNNTV INAVNLPAVS GDLLEKLSPF TTLADRMGRL LAQFSGANIT EIKIEYNGDF QGLDLAPVTT AAVKGLLTPL VAYQVNSVNA ASLAGEMGIA ITTRSETLPI DYTSLITISV TSGAGTHTVA GTIFGKKEAR VVRINDFRLE MIPTKGHFAI IHNLDKPGAI GSIGTTLGTF GVNIERMQVG QQGDTLRNII FLRTGSRIPD DALAAVKELP LVKDVTVFEL DE
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