Gene Dole_2813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2813 
Symbol 
ID5695670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3394644 
End bp3396242 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content61% 
IMG OID641265427 
ProductD-3-phosphoglycerate dehydrogenase 
Protein accessionYP_001530693 
Protein GI158522823 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID[TIGR01327] D-3-phosphoglycerate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATGA AAGTGCTTGT ATCCGACACC ATTGACGCGT CCGGCGTATC CCGCCTGGAG 
AACGAATCCG GCTTTGCCGT TGACGTTAAA ACCGGGCTTC CCCCGGAGGA ACTGAAATCC
ATTATTGGAC AGTACGACGC CCTGATCATT CGCAGCGCCA CCAAGGTGAC CGCCGATATT
CTCGAAGCGG GTGCCCCGAA GCTCAAGGCC GTGGCCCGGG CCGGCATCGG CCTGGACAAC
GTGGATATTC CCGCGGCTAC CAAGCACGGC GTGGCCGTGA TGAACACGCC GGAAGGCAAC
GTGGTGACAA CGGCGGAGCA CACCATTGCC ATGATGATGG CCCTGACCCG CAACATTCCC
CAGGGGACCC TCTCCCTGCG GTCCGGCCAG TGGGAAAAGA AAAAACTCCA GGGCCGGGAG
GTGTTCAACA AGACCCTGGG CGTGATCGGT TTCGGCAAAA TCGGTTCCAT CGTGGCCGAC
CGGGCCCGCC AGCTCAAGAT GAACGTTATT GTCTTTGACC CCAACATCGC CCGGACCACC
ATTGAAAATG AAGGGTTCGA GTATGTCTCT TTAGACGACC TTTTTGCCCG GGCCGACTAC
ATCACCGTCC ATGTACCCAA GCTCAAGCAG ACCGTGGGGC TTTTAAACAA GGCCGCCTTT
GAAAAGATGA AAACCGGCGT GATGGTTCTC AACTGCGCCC GGGGCGGCAT TGTGGATGAG
GCCGACCTGT ACGACGCCCT GATGTCGGGC AGGGTGGCGG CCGCGGCCCT GGACGTGTTT
GTGACAGAAC CGCCCGGTGA GCACCCCCTG CTCAAGCTGG ACAACGTGAT CGCCACGCCC
CATCTGGGCG CCTCTACCAA GGAGGCCCAG GTCAACGTGG CCGAGGCCGC GGCCCACCAG
ATCATTGAGT TCCTCAAAAA CAACACGGTG ATCAACGCCG TCAACCTGCC GGCCGTGTCC
GGCGACCTGC TGGAAAAACT GTCGCCCTTC ACTACCCTGG CCGACCGCAT GGGCCGCCTG
CTGGCCCAAT TTTCAGGGGC CAACATCACC GAAATCAAGA TTGAATACAA CGGTGACTTT
CAGGGCCTGG ACCTGGCGCC GGTCACCACC GCCGCGGTCA AGGGCCTGCT CACGCCCCTG
GTGGCCTACC AGGTCAACTC GGTAAACGCC GCCTCCCTGG CCGGAGAGAT GGGCATTGCC
ATCACCACCC GCAGCGAAAC CCTTCCCATC GACTACACCA GCCTGATCAC CATCAGCGTG
ACCTCCGGCG CCGGCACCCA CACCGTGGCC GGCACCATCT TTGGCAAAAA GGAGGCGCGG
GTGGTCCGGA TCAACGACTT CCGGCTGGAG ATGATTCCTA CAAAAGGCCA TTTTGCCATC
ATTCACAACC TGGACAAGCC CGGCGCCATC GGCAGCATCG GCACCACCCT GGGCACCTTC
GGCGTCAACA TCGAGCGCAT GCAGGTGGGC CAGCAGGGCG ACACCCTGCG CAACATCATC
TTCCTGAGAA CCGGATCGCG CATTCCCGAC GATGCCCTGG CGGCCGTAAA AGAGCTGCCC
CTGGTCAAGG ATGTGACGGT TTTTGAGCTT GACGAATAG
 
Protein sequence
MTMKVLVSDT IDASGVSRLE NESGFAVDVK TGLPPEELKS IIGQYDALII RSATKVTADI 
LEAGAPKLKA VARAGIGLDN VDIPAATKHG VAVMNTPEGN VVTTAEHTIA MMMALTRNIP
QGTLSLRSGQ WEKKKLQGRE VFNKTLGVIG FGKIGSIVAD RARQLKMNVI VFDPNIARTT
IENEGFEYVS LDDLFARADY ITVHVPKLKQ TVGLLNKAAF EKMKTGVMVL NCARGGIVDE
ADLYDALMSG RVAAAALDVF VTEPPGEHPL LKLDNVIATP HLGASTKEAQ VNVAEAAAHQ
IIEFLKNNTV INAVNLPAVS GDLLEKLSPF TTLADRMGRL LAQFSGANIT EIKIEYNGDF
QGLDLAPVTT AAVKGLLTPL VAYQVNSVNA ASLAGEMGIA ITTRSETLPI DYTSLITISV
TSGAGTHTVA GTIFGKKEAR VVRINDFRLE MIPTKGHFAI IHNLDKPGAI GSIGTTLGTF
GVNIERMQVG QQGDTLRNII FLRTGSRIPD DALAAVKELP LVKDVTVFEL DE