Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2808 |
Symbol | |
ID | 5695665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 3387855 |
End bp | 3389642 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641265422 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_001530688 |
Protein GI | 158522818 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.277541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTCCA GGCAGCGACG AACGGTTTCC TTAAAAAGCA TCTTTCTGTT CGGCATCGTG GGGGTGCTTC TGATTGCCGT GCCCATCTTC GTATTCGTGG TGGTCGACAA CATCCGTACC CATGACCAGC GGGTGGTGGA AAACATGAAA GGCAAAGGCG CGGCCCTGAT CCGCTCCTTT GAGGCCGGCA CCCGCACTGG CGTGGTGATG ATGATGTGGG GCGCGGAAAA GGTGCAGCGG CTGCTCATGG AGGTTTCCCT GCAGGAAGAC ATCGCCTACC TGCTGATTAC CGATGAGACC GGCGACATCC TTGCCCACAG CGACCCGGAC CGGGTGGGCA GCCGGTATGA GAATTTCCCG GAGATTCCGG CGGACCAGGC CCCCTCCACA ATTTCTCACC GCCGCGTGGA GCATGACAAC GGGCCGGTAT TCGAGGTATT CAAGCAGTTT ACGCCGGACC GGCCCCCTGC CGTCCGGGGC CGGCTCAAAA GCATGATCGA CCGGCTGCCG CCCGGAGAGC ACAAGCGGCT GTTCAACGAC TGGTGCGCCA TGCATTTTTT CCAGGACATG GACCAGCCCC CGGTGCGCCA GTTTATCTTT GTCGGCTTTG ACATGACCCG GCTGGACGCG GCCCGGTCCG CCTATATTCG CCGCGCAGTC CTCAACGGCA CGGTGGTGCT GCTGATCGTG TGCACCGGCA TGCTGGCGCT GTTTTCCATT CAGGCCTACC GGTCGGCCCG TTCCTCCTTT GTCCGTGTCA AGGCCCTTTC CGACGAGGTG GTGGCCAACA TGCCGGCCGG CCTGGTCACC TTCGGCCCCG GCCCGGAGAT CACGTCGTGC AACCGCCGGG CCGCCGAGAT TCTGGGTATG GCGCCCTGTC GTACGGATGA CGACCCGCTG GACATGGACC GTTTACCGCC GCCGGTGCGG CAGGTGGCCG ACCAGGTGGT TCAGGACGGA GGCAATGTCT CCCAGGAGGT GGAGGTGCCG GGGCCGGACG GTGTGGACCG GGTGCTGGAG ATCGGGGCCT CCCCCATTCA GGACGAAGGC GGCCGGGTGT CCGGCTACCT GCTGCTGATA AAAGATCTTA CCGGCATGCG CCGCCTGGAA AAAGAGGTGG CCCGCAGCCG CCGCCTGGCC GCCATCGGCA AGCTGGCCGC GGGCGTGGCC CATGAAATCC GCAACCCGTT AAGTTCCATC AAGGGGTTTG CCACCTATTT CAAGGAGAAG TTTTCGGATT CGGACCAGGA CAAGAAGACC GCCGACACCA TGATTTACGA GGTGGAACGG CTCAACCGGG CCGTGACCCA GCTTCTGGAG TTTGCCCGGC CCGTCTCCCT GGAGATAACC GAGGTAGAAC CCGGCGAGCT GATTGAGCAT TCCCTGCGGC TGATGGAAAA CGATTTTACC AACAAGGGTA TAGAATCCAC GGCCCGCATT CAAACGACCC GGCCCGTCAT CCGCACCGAC CGGGACCGGC TCAACCAGGT GCTGCTCAAC CTGTATTTAA ATGCCGTGGA CGCCATGGAG AGCGGGGGCC GCCTCACCGT CACCCTGTCC GACGGCGACA ACAACGATAC CGTGACCATC GATGTGACAG ATACCGGCCA CGGCATTGCG GAAAAGGATA TGGAGCAGAT TTTCGATCCC TATTTTACCA CCCGAAGCCG GGGCACCGGC CTGGGCCTGG CCATTGTCTA CAAGCTGGTG GAGAGTCTGG GCGGCACCAT CACCGTGGAG AGCCGGGAAG GCCACGGTAC AACGTTTCAT ATCCGCGTTC CGGCATGA
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Protein sequence | MKSRQRRTVS LKSIFLFGIV GVLLIAVPIF VFVVVDNIRT HDQRVVENMK GKGAALIRSF EAGTRTGVVM MMWGAEKVQR LLMEVSLQED IAYLLITDET GDILAHSDPD RVGSRYENFP EIPADQAPST ISHRRVEHDN GPVFEVFKQF TPDRPPAVRG RLKSMIDRLP PGEHKRLFND WCAMHFFQDM DQPPVRQFIF VGFDMTRLDA ARSAYIRRAV LNGTVVLLIV CTGMLALFSI QAYRSARSSF VRVKALSDEV VANMPAGLVT FGPGPEITSC NRRAAEILGM APCRTDDDPL DMDRLPPPVR QVADQVVQDG GNVSQEVEVP GPDGVDRVLE IGASPIQDEG GRVSGYLLLI KDLTGMRRLE KEVARSRRLA AIGKLAAGVA HEIRNPLSSI KGFATYFKEK FSDSDQDKKT ADTMIYEVER LNRAVTQLLE FARPVSLEIT EVEPGELIEH SLRLMENDFT NKGIESTARI QTTRPVIRTD RDRLNQVLLN LYLNAVDAME SGGRLTVTLS DGDNNDTVTI DVTDTGHGIA EKDMEQIFDP YFTTRSRGTG LGLAIVYKLV ESLGGTITVE SREGHGTTFH IRVPA
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