| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2736 |
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| Symbol | lpxC |
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| ID | 5695592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 3303452 |
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| End bp | 3304345 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641265349 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_001530616 |
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| Protein GI | 158522746 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0040907 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCTTT TTCAGCGGAC CGTGGCCAGC CCGGTTACCT GTACCGGGGT GGGGGTCCAT
TCGGGCAAGC CGGTTACGCT GGTGGTAAAA CCGGCGCCCC CCAACCACGG CATCAAGTTT
GTTCGCACCG ATCTTCGAGA TGCTCCCCGT ATTCCCGCGC TCTTCAGAAT GGTCACGGAT
ACCAGCCTGG CCACCGTGCT GGGCAGCAAC GGCGCCATCG TATCCACCGT GGAGCACCTG
ATGGCCTGCT TTTCGGGCAT GGCCGTGGAC AACGCCCTGG TGGAGGTGGA CGCTTATGAA
CTGCCCATCA TGGACGGCAG CGCCTTCCCC TTTGCAGATG CCGTGTCCCG GGTGGGATGC
GTGGAACAGG AGGCCCGGCG CTGTTTTTTT ATCATCAAAA AGCCCCTGGA AATAGAGGAA
GACGACCGGT CCGTGAGCAT ATATCCGGCA TCCGGCTATA CCATCTCGGC CACTATCGAA
TATGACCACC CCCTGATCGG CACCCAGTCC CGCACCGTTG AGGTGAACAC CGAAACCTTT
ATGAACGACA TCAGCAAAGC CCGCACCTTC GGGTTTTATC ATGAATACGA ATACCTGAAG
CAGCATGGCC TGGCCAGGGG GGGCTCTCTG GACAATACCG TAGTGCTGGA TGGTTCGAGT
ATCCTGAACG AGGGGGGGCT GCGCTTTGAT GATGAGTTTG TCCGGCACAA GATCCTGGAC
TGCATCGGCG ATTTTTCTCT ACTGGGCATG CCCCTGCTGG GCCGCATCGT TGCCTGTAAA
TCGGGGCACC TGTTTAATCA CCGGCTCCTG GAGGCCCTGT TCGCGAACAA GGAGTGCTGG
GAAACCGGCT TTCCGGAACT TCCGCAACCC GCGGCAAAAG CCCTTGCCTT TTAG
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| Protein sequence | MYLFQRTVAS PVTCTGVGVH SGKPVTLVVK PAPPNHGIKF VRTDLRDAPR IPALFRMVTD
TSLATVLGSN GAIVSTVEHL MACFSGMAVD NALVEVDAYE LPIMDGSAFP FADAVSRVGC
VEQEARRCFF IIKKPLEIEE DDRSVSIYPA SGYTISATIE YDHPLIGTQS RTVEVNTETF
MNDISKARTF GFYHEYEYLK QHGLARGGSL DNTVVLDGSS ILNEGGLRFD DEFVRHKILD
CIGDFSLLGM PLLGRIVACK SGHLFNHRLL EALFANKECW ETGFPELPQP AAKALAF
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