| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2701 |
|---|
| Symbol | |
|---|
| ID | 5695556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 3257355 |
|---|
| End bp | 3260078 |
|---|
| Gene Length | 2724 bp |
|---|
| Protein Length | 907 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641265313 |
|---|
| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
|---|
| Protein accession | YP_001530581 |
|---|
| Protein GI | 158522711 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0474] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGTC TTCCTGAAAA AACATGGCAC GCGATAGATG CGCGGGAGGC GGTTTCCGTC
CTTGAGTCCC ATGAAACCAA CGGCCTTTCC CGAACAGCGG CCGATGAGCG GGCAACCCGG
TTCGGCCTCA ATGAGCTGAC CCGGGCAAAG GGCCAGGGAG CCCTTATCCG GTTTCTGCTG
CAGTTCAAGC AGCCCCTGGT AATCATCCTT ATGGCCGCGG CCCTGATCAC CCTGCTGCTG
GCCGAATATG TGGACTCGGC GGTCATTTTT GCCGTGGTGC TGGTCAATGC CGTCATCGGT
TTTGTACAGG AGTCCAAGGC CATGAAGGCC ATCGAAGCCC TGGCCGACGC CATGATCAGC
GAGGCCACGG TGATCCGGGA CGGTGAAAAA CAGCGTCTCC CCTCCCGCCT GCTGGTACCC
GGGGACCTGG TGCTGCTGCA ATCCGGGGAC AAAGTGCCGG CCGACATGAG ACTGATAAAA
ATCCGGGAAC TGCAGGTCGA TGAAAGCGCG CTGACCGGTG AAAGCGTTCC GGTTCAGAAA
GCGGAAGGCA AACTGGATCC CGAAATGAGC ATCGGAGACC GGCGCAACAT GGCCTACTCC
TCCACCCTGG TCACCTACGG CACCGGTCAG GGTGTGGTGG TGGCCACCGG GGATGGCACC
GAGATCGGCC GTATCAACCA GCTCATTGCA TCGGCCGATG TGCTGGAAAC CCCTCTGACA
AAAAAGATTC ACCACTTTTC CAATATTCTC CTCTATGCCA TCCTGGCCAT GGCGGCCCTG
ACCTTTGTGG TGGGGTTTGT CCGGGGCCAG GACCTGGTGG AGATGTTTAT GGCGTCTGTG
GCCCTGGCCG TGGGCGCCAT TCCCGAGGGT CTGCCGGCGG CCATCACCAT CACCCTGGCC
ATCGGTGTTT CCCGTATGGC CAAACGCAAC GCCATTATCC GCAAACTGCC GGCCGTGGAA
ACCCTGGGCT CCACCATGGT GATCTGTTCG GACAAGACCG GTACCCTGAC CCAGAACCAG
ATGACGGTAC TGGATATCGT GGCTGGAGGG CCCCGCTACG AGGTATCGGG CGGCGGGTAT
GATCCGGAGG GCGTTATTTC GTCTGTTAAG GACGGGACTG ATCCGGCATC CAACATCGCC
CTTTCCGAGC TTTTAAAGGC AGGGCTGCTG TGCAACGATT CGCGCCTGAA AAAAACCGAC
ACCGGCTGGC GGGTGGAGGG AGACCCCACG GAAGGTGCCC TGATCGCGGC TGCGGCCAAG
GCCGGTTTTG ATCCCCGTCA ACTGGAAAAA GAGATGCCCC GGCTTGACAC CATTCCCTTT
GAGTCGGCCC GCCAGTACAT GGCCACCCTG CACGACCGGG GAGAAGGCAA ACCGCCGGTA
CTTTATGTCA AGGGATCGAT TGAAAGCGTC TGCGTGGAGT GCGCCACTAT TTTAGGCCCG
GACGGCGAAC CGGATATTGC CGGGCCGGGG GCCATTTCCG GATGGGTGGA ATCCATGGCC
GAAAAGGGGC TGCGGGTTCT GGCCTTTGCC CGCAAGGAGA TGCCGGCGGG CACCACCACA
ATCACCCACG CGGACGTGGA GGAGGGCATT GTGTTTATCG GCCTTCAGGG CATGATCGAT
CCGCCCCGTC CCGAGGCGAT AGAGGCGGTG GCTGCCTGCC AGGCAGCGGG TATCCGGGTC
AAGATGATCA CCGGGGACCA TGCCGGCACG GCCGGGGCCA TTGCCCGGCA GATCGGCCTG
TGCGGCGACA CCTGCTTCTA CCACACCCGC GAGGTCCTCA CCGGAAAGGA GATTGCCGCG
CTTGAGGCCC AACAACTGGT GGAGACCGCG GACAGCACCG CCGTGTTTGC CCGGGTATCG
CCGGAGCAGA AACTGCGGCT GGTGGAGGCC CTTCAGCAAA GGGACTACGT GGTGGCCATG
ACCGGGGACG GGGTCAATGA TGCCCCGGCC CTGCGCCAGG CCGACATCGG CGTGGCCATG
GGCATGACCG GCACCGAGGT TTCCAAGGAG GCGGCCGACA TGGTACTCAC CGACGACAAC
TTTGCCACCA TCAAGGCCGC GGTGGAAGAG GGCCGGGGCG TGTTTGACAA CCTGATCAAG
TTCATCACCT GGACCCTGCC CACCAATGGC GGCGAGGGCA TGATCATCCT GCTCGCCATT
CTCCTGGGCA CCCGCCTGCC CATTCTGCCC CTTCAGATTC TCTGGATCAA CATGACCACC
GCCCTGCTGC TGGGGCTGAT GCTGGCCTTT GAGCCCAAGG AGGCGGGCAT CATGGCCCGT
CCGCCCCGGG ACCCGGGCAT GCCCATTCTT ACACGGCCCC TGATCCTGCG CATTCTGATG
GTCAGCCTGC TACTGGTGAT CTGCGCCTTT GGCCTGTTTA AAATCGAACT GGCGCTGGCC
GGCAATGACG AGGCCCTGGC CCGAACCCTG GCGGTTAATG TCTTTGTGTT CGGTGAAATG
TTTTACCTGT TCAACTGCCG CTCCATGACC CGCCCGGTGT GGTCCCTTGG TCTTTTCAGC
AATCCCCTGC TCTGGGCCGG GGTGGCGGTG ATGACCCTGC TGCAGATGCT TTACACCTAC
CTGCCCGCGC TCAACACCGT TTTCCAGAGC GCGCCCATGG GGCTGACCGA GTGGGCCATG
GTGATAGGCG CCGGACTGAT GATCTTCACG GTGGTGGAAT GTGAGAAATG GGTGGGCCGC
AAGCGACGCT TTCAAGAGGT ATAA
|
|---|
| Protein sequence | MRSLPEKTWH AIDAREAVSV LESHETNGLS RTAADERATR FGLNELTRAK GQGALIRFLL
QFKQPLVIIL MAAALITLLL AEYVDSAVIF AVVLVNAVIG FVQESKAMKA IEALADAMIS
EATVIRDGEK QRLPSRLLVP GDLVLLQSGD KVPADMRLIK IRELQVDESA LTGESVPVQK
AEGKLDPEMS IGDRRNMAYS STLVTYGTGQ GVVVATGDGT EIGRINQLIA SADVLETPLT
KKIHHFSNIL LYAILAMAAL TFVVGFVRGQ DLVEMFMASV ALAVGAIPEG LPAAITITLA
IGVSRMAKRN AIIRKLPAVE TLGSTMVICS DKTGTLTQNQ MTVLDIVAGG PRYEVSGGGY
DPEGVISSVK DGTDPASNIA LSELLKAGLL CNDSRLKKTD TGWRVEGDPT EGALIAAAAK
AGFDPRQLEK EMPRLDTIPF ESARQYMATL HDRGEGKPPV LYVKGSIESV CVECATILGP
DGEPDIAGPG AISGWVESMA EKGLRVLAFA RKEMPAGTTT ITHADVEEGI VFIGLQGMID
PPRPEAIEAV AACQAAGIRV KMITGDHAGT AGAIARQIGL CGDTCFYHTR EVLTGKEIAA
LEAQQLVETA DSTAVFARVS PEQKLRLVEA LQQRDYVVAM TGDGVNDAPA LRQADIGVAM
GMTGTEVSKE AADMVLTDDN FATIKAAVEE GRGVFDNLIK FITWTLPTNG GEGMIILLAI
LLGTRLPILP LQILWINMTT ALLLGLMLAF EPKEAGIMAR PPRDPGMPIL TRPLILRILM
VSLLLVICAF GLFKIELALA GNDEALARTL AVNVFVFGEM FYLFNCRSMT RPVWSLGLFS
NPLLWAGVAV MTLLQMLYTY LPALNTVFQS APMGLTEWAM VIGAGLMIFT VVECEKWVGR
KRRFQEV
|
|---|
| |