Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2673 |
Symbol | |
ID | 5695524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 3214361 |
End bp | 3216571 |
Gene Length | 2211 bp |
Protein Length | 736 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641265281 |
Product | RecD/TraA family helicase |
Protein accession | YP_001530553 |
Protein GI | 158522683 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTACGC TTCAAGGGGT CCTGGAGACC ATTCGATATC GCCATCCTTC CACTTTTTAC ACCATTGCCG GTCTGCGTGT GGCCCGGCCC GGCACCCTTG TCACGGTGGT GGGCATCCTG CCCGGCGTGA CGCCGGGGCA GACCGTTACC CTCACCGGCG AATGGACTAC CCATGCCCGG TACGGCCAGC AGTTTTCCGT GAAAACCTGT GACGTCACCC TTCCCGCCAC GGTGGAAGGT ATTCAGAACT ACCTGCAATC CGGCCTGGTC CAGGGCGTTG GAACCGCCAT GGCCAGAAAG ATCACCCGCC ATTTCGGCAA AGAGACATTT TCCGTGATTG AAAACCAGCC TGAGCGGCTG GCCGAAGTGC CGGGCATCGG CGCAGCAACA GCGCTCATGA TCCGGAATGC CTGGCGCGAG CACCATGCTG TCAGGGAGTT GATGGTGTTT TTGCAGGAAA AAGGGGTGGA TGCCTCCCTC AGCGCCCGGA TTTTCCGGGC GTATGGAGAG GCGGCGGTGG ATATCCTGCG GGCCGACCCC TTTCGCCTGG CCGAGGACCT GCCGGGCCCC GGGTTTGTGA TCGCCGACAC CATCGCCCTT TCTTCAGGTG CCAGGGCCGA CGACCCCCGG CGGATAAGGG CCTGCGTGCG CCACACCCTG GACCAGAACA GAACGGCAGG CAACGTGTTT GCCTTTGTTT CCCACCTGGT GGACCATTGC GGCACGCAGT TTCACATTGA CCCAGCGGAT GTGGAGACCG CCCTTTTCGA GCTGGCCCGG GCCGAGGAAC TGGTGATAAC CGAGATGCCC GGCCCGGACC CGGATGTGGC CATTGTTTAT CCGGCGGACC TGTACGCCGC TGAAACCGGC ATCGCGGCCC GGCTGGCCGC GTTTGCCTCG GTCCCTGTCA CCACGGACCG GGCCGACAGC GACCAGATCA TGGACCAGGT GGTGCGGCAG TTGGCCATTC AGCCCTCTGT CGAACAGCTG GCGGTGATTC AAAACATTCT TTCCCACCGG GTGGTGGTGG TGACCGGAGG GCCGGGCACG GGCAAGACCA CCCTGATCCG GGCCATTGCC GCGGTGTTCG AGGGTGCCGG TAAAAAAGTG ATGCTGGCCG CGCCCACGGG CCGGGCCGCC AAACGTCTCT GCGAAGTGTC CGGCAAGGAG GCGGTCACCC TTCACCGGCT GCTGGGCATC GGGTTTGAGG AAACCCCTTT TCTGAAAAAT CAGGACAACC AGCTTCGCGC CGACGTGATC GTGGTGGACG AGGCCTCCAT GGTGGACATT CCGCTTTTTT TTGCCCTGCT GTCCGCCACT CCGGTAACCG CCGGGCTGGT GCTGGTGGGG GATGTCTATC AGCTGCCGTC GGTGGGCCCG GGCAACGTGC TGCGGGATCT GATTGCATCC GGCAGCCTGC CGGTGTTTGA GCTGACCCAG GTGTTCCGCC AGGCTGAACA GAGCGCCATT GTGCGGAACG CCCACCGCAT TCGCCGGAGC GAGCCGCCGG ACCTGGCGTC CGCCGCTGCC ATCTCCCCGG ATACCGGCTT CTGGTTTGTA GAAAAAGAAA CTCAGGAAGA AATCGCCGCC ACGATAAAAG ACCTGTGTGT TTCCCGGTTG CCGCGAACCT TTGGCCTGGA CCCGGCAAAC GATATTCAGG TACTCACCCC CATGCACAAG GGCCCGCTGG GCACCATCGC TTTGAACCAT GCACTCCAGC AGGCATTAAA CCCGGATGGC CCCGGGAATA AAGAGACACT GGCCGGTTTC AGGCCCGGCG ACAAGGTGAT GCACCTGAGA AACAACTACA CCAAGGAGGT GTTCAACGGC GACATCGGTA CTGTGGCGGC TGTGGACACA CGGCGGCGCA TGATTGATGT GAACTATGAC GGCCGCATCG TCGAATATGA TGTGGTCGAA GCCGATGAGC TGACCCTGGC CTATGCGATC ACGGTGCACA AGTCCCAGGG ATCGGAGTAC CCGGCGGTGG TGCTGCCCAT GACCACCCGG CATTACACCA TGCTGGAGCG TAACCTTTTT TATACCGCCA TGACCCGGGC ACGGCAACTG GTGGTGCTGG TGGGGACATC AAAAGCAGTG GCAGTGGCCA TGCGGAAAAA CACCCCGAAA ACCCGGCTGT CGCTTCTGGC CGCCCGCCTC AACCCGGCCA TCATCGACGA GGAACGGTTT GCGCAGGACG ATATGACCTG A
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Protein sequence | MITLQGVLET IRYRHPSTFY TIAGLRVARP GTLVTVVGIL PGVTPGQTVT LTGEWTTHAR YGQQFSVKTC DVTLPATVEG IQNYLQSGLV QGVGTAMARK ITRHFGKETF SVIENQPERL AEVPGIGAAT ALMIRNAWRE HHAVRELMVF LQEKGVDASL SARIFRAYGE AAVDILRADP FRLAEDLPGP GFVIADTIAL SSGARADDPR RIRACVRHTL DQNRTAGNVF AFVSHLVDHC GTQFHIDPAD VETALFELAR AEELVITEMP GPDPDVAIVY PADLYAAETG IAARLAAFAS VPVTTDRADS DQIMDQVVRQ LAIQPSVEQL AVIQNILSHR VVVVTGGPGT GKTTLIRAIA AVFEGAGKKV MLAAPTGRAA KRLCEVSGKE AVTLHRLLGI GFEETPFLKN QDNQLRADVI VVDEASMVDI PLFFALLSAT PVTAGLVLVG DVYQLPSVGP GNVLRDLIAS GSLPVFELTQ VFRQAEQSAI VRNAHRIRRS EPPDLASAAA ISPDTGFWFV EKETQEEIAA TIKDLCVSRL PRTFGLDPAN DIQVLTPMHK GPLGTIALNH ALQQALNPDG PGNKETLAGF RPGDKVMHLR NNYTKEVFNG DIGTVAAVDT RRRMIDVNYD GRIVEYDVVE ADELTLAYAI TVHKSQGSEY PAVVLPMTTR HYTMLERNLF YTAMTRARQL VVLVGTSKAV AVAMRKNTPK TRLSLLAARL NPAIIDEERF AQDDMT
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