Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2659 |
Symbol | |
ID | 5695510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 3200116 |
End bp | 3201090 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641265267 |
Product | dihydrouridine synthase DuS |
Protein accession | YP_001530539 |
Protein GI | 158522669 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCATGA CCCTCTGCAT GGCCCCCATT CGGGGCATCA CCGATCATAT CTTCCGCACC GCCTTTGCCG AACACTTCGG CGGGTTTGAC ACGGCGGTGG CTCCTTTTGT TTCCAGCCGT AAAGACAGAA AAATCAAAAG CGCCCACCTG AAAGACCTGC TGCCTGAATA CAACACCGCC CTGCCGGTGG TGCCCCAGAT TCTGAGCAAC AGCGGCGAGG ATTTTGTCTA TCTGGCCGAC CATCTGTACG ATCTGGGGTA TTCGGTGACA AACTGGAACC TGGGATGCCC CTATCCCATG GTGGCCAAAA AATACCGGGG CGCGGGCCTG CTGCCCCACA CGGACCGGAT CGCGGAATTT CTCGACACCG TCATGTCCCG CATGAAGGGC GGTCTTTCTG TCAAAATCCG GCTGGGATGG GCGGATACAA CAGAGTTGAT GGGCCTGCTG CCGGTGCTGC ACCGGTATCC CCTGGCCGAG CTGATCGTGC ATCCGCGGAC CGGGATTCAG CGGTACGAAG GAACCGTTGA CCTGGCGGCC TTTGAACGAG TGCTGGAGAA CACCGGCCTT CCGGTCATGT ACAACGGTGA CATTCAGACA GTTGCGGATT TTGCATACCT GTCCGGCCGC TTCAAGGCGG TGGACCGGTG GATGATCGGC CGGGGAGCGC TTGCCGACCC TTTTCTGCCG GCAGCCATTG GCGGCAGTCA GCCGGAGGAA AAAGAAAAGG TGGCCCGAAT GCGAAATTTT CACGACGACC TGATGGCCCG CTATACCCTT CGTTTAAACG GACCGGTCCA CCTGCTGGAC CGGATGAAGG GGCTGTGGCG CTATTTTATC CTGCTCTTTG AAACGCCGGA CAAATCCGCC AAATCGATCT TCAAGTCAAA AGAGATCGCC GCCTACCAGG ACCATGTGGC CCGGTTTTTT GATACCGGCC CACGAATTGC CAAAAAAAAG CCTACTTTTT TTTGA
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Protein sequence | MPMTLCMAPI RGITDHIFRT AFAEHFGGFD TAVAPFVSSR KDRKIKSAHL KDLLPEYNTA LPVVPQILSN SGEDFVYLAD HLYDLGYSVT NWNLGCPYPM VAKKYRGAGL LPHTDRIAEF LDTVMSRMKG GLSVKIRLGW ADTTELMGLL PVLHRYPLAE LIVHPRTGIQ RYEGTVDLAA FERVLENTGL PVMYNGDIQT VADFAYLSGR FKAVDRWMIG RGALADPFLP AAIGGSQPEE KEKVARMRNF HDDLMARYTL RLNGPVHLLD RMKGLWRYFI LLFETPDKSA KSIFKSKEIA AYQDHVARFF DTGPRIAKKK PTFF
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