| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2649 |
|---|
| Symbol | |
|---|
| ID | 5695500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 3190081 |
|---|
| End bp | 3191391 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641265257 |
|---|
| Product | cytochrome bd ubiquinol oxidase subunit I |
|---|
| Protein accession | YP_001530529 |
|---|
| Protein GI | 158522659 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000262773 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCCGT TAATGCTTTC CCGGCTTCAG TTTGCCGCAG CGACCCTGTT TCATTTCATC
TTTGTTCCCC TCACCCTGGG CCTTGCCGTG CTCATCGCCT TCATGGAGAC ACGGTATGCA
TGGACCGGGG ACAAGACCTA TCTTAAAATG GTCAAATTCT GGGGCCGGCT GTTTCTGATC
AATTTCGCCC TGGGCGTGGT GACCGGCATC ACCCTGGAGT TCCAGTTCGG CACCAACTGG
GCCCGGTACT CGGCCTATGT GGGTGACGTG TTCGGGTCCC TGCTGGCCAT TGAAGCCACT
GTGGCCTTTT TTCTGGAGTC GGTGCTGCTG GGCGTCTGGA TCTTCGGCTG GAAAAAGCTC
TCCGCCAAGG CCCATGGCAT TGTAATGTGG CTGGTGGCCC TGGCCGGCAC CTTTTCCGCC
GTCTGGATTC TGATCGCCAA CGCCTGGATG CAGCACCCGG TGGGCTACGT GATCCGCAAC
GGCCGGGCCG AGCTGGAAAA CTTCTTTGCC GTGGTCACCC AGCCGTTTGC CGTTCTGATG
ATTCTTCACA CCCTCAGCGC CGCCTACATT GTTGCCGCTT TTTTCGTGAT GGGCATCAGC
GCCTACCATC TTTTGAAAAA ACAGCACGTG GAGGTCTTTA CCCGTTCCTT TAAAATCGCC
CTGGTGTTCG GCCTGGTTTT TTCCTTTTTT GAAGTGGCCG AAGGCCACCT GCACGGCGCC
GACCTGGCCC ACAGCCAGCC GGCCAAGCTG GCGGCCCTGG ATGCCCACTG GGAAACATCC
GAACGGGCGC CTTTGTATTT TTTCGCCATT CCCGATGAAA AAAACGAGAG AAACATTCTT
GAAATCGGCA AGGTGCCGGG GGGCCTGAGC CTCATGGCCT TTCACGATTT CAACGCCGAA
GTAAAGGGAT TAAAGGACTT TCCAAAAGAT GAGCGGCCAC CGGTGCTGAT CACCACGGTC
TCCTTCAAGA TCATGGTGGG CCTGGGGTCA CTGTTCTGCC TGCTGACGGC AGTCGGCTTT
TTCCTGCGCA ACCGGCTGAT GGAAACCCCG TGGTACCTGA AAATCATGGT GGCCGCCATT
CCCCTGCCCT ATATCGCTTC CGAACTGGGC TGGGTGGTGG CCGAGGTGGG CCGCCAGCCC
TGGATCGTGT ACGGGGTCAT GAAAACCGCG GACGCGGTGT CGGCCAATAT TTCCGCCGGC
CAGGTGGCCG TCTCCCTGGC GGGATTTGTC CTGGTGTACG GCCTGCTGGG CGCTGTGGGT
ATCTACCTGA TGGCGACCAG TGCCGTTAAA GGCCCTGTCG AACTCGAATA A
|
|---|
| Protein sequence | MDPLMLSRLQ FAAATLFHFI FVPLTLGLAV LIAFMETRYA WTGDKTYLKM VKFWGRLFLI
NFALGVVTGI TLEFQFGTNW ARYSAYVGDV FGSLLAIEAT VAFFLESVLL GVWIFGWKKL
SAKAHGIVMW LVALAGTFSA VWILIANAWM QHPVGYVIRN GRAELENFFA VVTQPFAVLM
ILHTLSAAYI VAAFFVMGIS AYHLLKKQHV EVFTRSFKIA LVFGLVFSFF EVAEGHLHGA
DLAHSQPAKL AALDAHWETS ERAPLYFFAI PDEKNERNIL EIGKVPGGLS LMAFHDFNAE
VKGLKDFPKD ERPPVLITTV SFKIMVGLGS LFCLLTAVGF FLRNRLMETP WYLKIMVAAI
PLPYIASELG WVVAEVGRQP WIVYGVMKTA DAVSANISAG QVAVSLAGFV LVYGLLGAVG
IYLMATSAVK GPVELE
|
|---|
| |